| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08630 |
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| Symbol | mnmA |
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| ID | 8386200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 884364 |
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| End bp | 885455 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644974954 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_003132750 |
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| Protein GI | 257054918 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.182039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGGTAT TGGCCGCGAT GAGCGGGGGA GTGGACTCGG CGGTCGCCGC CGCCAGGGCC
GTCGACGCGG GCCACGACGT GGTCGGTGTG CATCTGGCGT TGTCGGCCAA GCCCGGCACG
CTGCGCACGG GTTCCCGGGG CTGCTGTTCC CTCGAGGATT CCAACGACGC GCGGCGGGCC
GCCGACATCC TCGGCATCCC GTTCTACGTG TGGGACTTCG CCGAGCGGTT CACCGAGGAG
GTCGTGGAGA CCTTCATCGG CGAGTACGCC GCGGGCCGCA CCCCCAACCC GTGCGTCACC
TGCAACGAGA AGATCAAGTT CGAGGCGTTG CTGGAGAAGG CGGTGGCGCT GGGGTTCGAC
GCCGTGTGCA CCGGGCACTA CGCCCGGCTT TCCGTGGTGG ACGGCGTTCC CGAACTGCGC
CGCAGCGCCG ATGAGAGCAA GGACCAGTCG TACGTGCTCG CGTCGCTGAA GCCGGAACAG
CTGCGACACG CGATGTTCCC GCTCGGGGAT TCCCGCAAGC CGGAGGTGCG CGCCGAGGCC
GCCGAGCGAG GACTGCCCGT GGCGCGGAAG CCGGACAGCC ACGACATCTG CTTCATCCCC
GACGGCGACA CCAAGGCCTT CCTGGAGAAG CGCCTCGGAC AACGTCCCGG TGACCTCGTG
GACGCCGAGA CGGGAGCCGT GCTCGGCAGG CACACGGGGG TGCACGGGTT CACCATCGGG
CAGCGCAAGG GACTCGGCAT CGACGCGCCC GCGCCGGACG GCAAACCGCG TTACGTACTC
GCCTTAGAAC CGGTGTCCGG CACCGTGAAG GTCGGCTCGG GGGACAAGCT CGCGGTGAAC
CGAATCGAGG GTGAGCGGCC CATCTGGCCG AGCGAGCGCC CCTTGGCCGG GCCCACCGAG
TGCGTGGCCC AGGTCCGTGC TCACGGCGGC ACGGCGCCGG CGGTGGCGGA GGTCGTCGAC
GACCGGGTGG TGGTGCACTT GCGCGAACCG TTGCGCGGTG TGGCGCCGGG GCAGGTCGTG
GTGCTGTACC GGGAGGACGC CGAGGCGGGC GACGTCGTGT TGGGCAGCGC GAAGATCGCC
GCCACGGCGT GA
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| Protein sequence | MRVLAAMSGG VDSAVAAARA VDAGHDVVGV HLALSAKPGT LRTGSRGCCS LEDSNDARRA
ADILGIPFYV WDFAERFTEE VVETFIGEYA AGRTPNPCVT CNEKIKFEAL LEKAVALGFD
AVCTGHYARL SVVDGVPELR RSADESKDQS YVLASLKPEQ LRHAMFPLGD SRKPEVRAEA
AERGLPVARK PDSHDICFIP DGDTKAFLEK RLGQRPGDLV DAETGAVLGR HTGVHGFTIG
QRKGLGIDAP APDGKPRYVL ALEPVSGTVK VGSGDKLAVN RIEGERPIWP SERPLAGPTE
CVAQVRAHGG TAPAVAEVVD DRVVVHLREP LRGVAPGQVV VLYREDAEAG DVVLGSAKIA
ATA
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