Gene Svir_08440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08440 
Symbol 
ID8386181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp859792 
End bp861087 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content66% 
IMG OID644974935 
ProductNADH dehydrogenase, FAD-containing subunit 
Protein accessionYP_003132731 
Protein GI257054899 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAC GCATTCTCAT CGCCGGGGGC GGCTATGTCG GCCTCTACAC CGCGCTGCAG 
CTGCAGAAGA ACATGCAGCC CGGCGAAGTC GAGGTGACGG TGGTGAACCC CGAGAACTTC
ATGGTGTACC GGCCGCTGTT GCCCGAGGTG GCCTCCGGGA CACTCGAACC ACGGCATGCC
GTGGTACCGC TGCGGGCGGT GCTGCGGAAG TCGCGGTTCG TCTCCGGCAC CCTCACCGGA
CTCGACGTCG AACGGCGTGT GGCCACCGTG CAACCACCCG CGGGGCCGAC GCGGGAATTC
GAGTACGACG AACTCGTACT CGGTCTGGGC GCGACGTCCA AACTGCTGCC CATCCCGGGG
CTGGTCGACC ACGGCATCGG CTTCAACTCC CTCGCCGAGG CCGCCTACCT CCGTGATCAC
GTACTGGGGC AGTTGGAGCT CGCCCATGCC ACCAACGATC CCGAACTACG CCGATGCGCC
TTGACGTTCG TGTTCGTCGG CGGCGGCTAC ACCGGTGTGG AGGCGATCGC CGAACTGCAG
GACATGGCCG TGGACGTGTT GGAGGGCTAT CCCGGCCTCG ACCCCGCTGA GATGCGGTGG
ATCCTCATCG AGGCGATGGA CCGCATCCTC GGCACCGTCA GTGACGATCT CGCCGAACTC
GCGACCACCG AACTCACCGC GCGAGGTATC GACATCCGTA CCGGCACGCT GTTGGAGTCG
GCCGAGAACG GTCGGCTGCA ACTGTCCGAC GGCACCAAAC TGACCACCGA CACACTCGTC
TGGGTGGCGG GAACACGACC GCAGAGCATC CTCGGTGAAC TCGGCCTTCC CGTGGACGAA
CGCGGCAGGG TCGTCGTCGA CGACACGTTG CGCGTCAACG GGCACGCCAA CATCTGGTCG
GCGGGGGACT GTGCGGCCGT GCCCGACCTG GTGAAGGGAG GGACCTGTCC GCCCTCCGCC
CAGTACGCGG TGCGGCAGGC CCGACAGCTC GGGGACAACC TGTTGCGCAC GGTCCGCGGC
CAAGCCGTGA AGTCGTTCCG CTACCGAAGC CGCGGCGAGT TCGTGACACT CGGTAAGAAC
AAGGCCGTGG CCGAGGTATT GGGCTGCAAG ATCAACGGTT CGTTGGCGTG GACGTTGCGG
CGGGCCTACT ACGCCACGCA GATCCCGATG CTGAACCGCA CGGTGCGGGT ACTGGGTGAC
TGGCTCATCG GCATGCCGTT CGGGCACGAC GTGGTGGACT TCGGTTCGCG GGAGGAGCCC
CGAGGCGCCT TCAGAAGAGC CGCAGGAAAG CGCTGA
 
Protein sequence
MPKRILIAGG GYVGLYTALQ LQKNMQPGEV EVTVVNPENF MVYRPLLPEV ASGTLEPRHA 
VVPLRAVLRK SRFVSGTLTG LDVERRVATV QPPAGPTREF EYDELVLGLG ATSKLLPIPG
LVDHGIGFNS LAEAAYLRDH VLGQLELAHA TNDPELRRCA LTFVFVGGGY TGVEAIAELQ
DMAVDVLEGY PGLDPAEMRW ILIEAMDRIL GTVSDDLAEL ATTELTARGI DIRTGTLLES
AENGRLQLSD GTKLTTDTLV WVAGTRPQSI LGELGLPVDE RGRVVVDDTL RVNGHANIWS
AGDCAAVPDL VKGGTCPPSA QYAVRQARQL GDNLLRTVRG QAVKSFRYRS RGEFVTLGKN
KAVAEVLGCK INGSLAWTLR RAYYATQIPM LNRTVRVLGD WLIGMPFGHD VVDFGSREEP
RGAFRRAAGK R