Gene Svir_08380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08380 
Symbol 
ID8386175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp856215 
End bp857654 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content67% 
IMG OID644974929 
ProductFAD/FMN-dependent dehydrogenase 
Protein accessionYP_003132725 
Protein GI257054893 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTGG ACAACCGGTC AGCGTCGAAT CCCCCCGCGG ACGCCACACC GCGTTCCCGG 
CCGGGCGATC CCTCGGCCAA CGTCTCGGAA GCCCCACCGA ACACCCATGC GGACCGGGTG
GCGGCGCTGC GTACACAATG GGACGCGCAA CCGCCCGACA CGCCGATCCG GCTGGCCAAG
CGGACCTCCA ACCTGTTCCG TCCCAGGACC CGGACGACGT CGCCGGGCCT GGACGTCTCG
TCTTTGACCC ACGTACTCGA CGTCGACCCG GTGGCCCGTA CCGCCGACGT GGAGGGCATG
GTCACCTACG AGCAGCTCGT CGACGCGACC CTGCCCCACG GCCTGATGCC ACTGGTGGTC
CCGCAGCTGA AGACGATCAC CGTGGGTGGG GCCGTGACCG GTCTCGGCAT CGAGTCGTCG
TCGTTCCGCA ACGGCATGCC CCACGAGTCG GTGCTGGAGA TGGAGATCCT CACCGGCGAC
GGCGAGGTGG TGCTCGCACG TCCGAGCAAC GAACACTCCG AGCTGTTCTT CGGCTTCCCC
AACTCCTACG GCACGCTCGG CTACGCGCTG CGACTGCTCG TCGAACTGGA GCCCGTACGG
CCCTACGTGC GGCTGCGGCA TCTGCGGCAC AGCGATCCGC GCACCTACTT CGCCGAACTG
GCGCGGCACT GCGCCGAGGG CGACGCGGAC TTCGTCGACG GGACCGTCTT CGGTCCCGAC
GAGCTGTACC TGACGTTGGG CACGTTCACC GACGAGGCCC CCGCCACGAG TGACTACACG
TGGCTGGACG TCTACTACAC CTCCATCCGC GAGCGGGACA TCGACTACCT GCACACCAGG
GACTACCTGT GGCGCTGGGA CACCGACTGG TTCTGGTGCT CCCGTGCGCT CGGGGTCCAG
CACCGGTTGG TCCGCCTGTT GCTGGGACCG GACCGACTGC GTTCGGACAA CTATTGGAAG
ATCGTCGCCT TCGACCGCAG GCACGGCGTG TCCCGACGCG TGAACCGTCT GCTGGGCAGA
CCTCAGCGCG AAGCGGTGAT CCAGGACATC GAGGTGCCCG TCGACGCCGC TGCCGATTTC
CTGGACTTCC TGCACCGTGA GGTCCCGCTC AGTCCGGTGT GGATCTGCCC GGTGCGGCAG
CGGCACCCCG ACCGGCAATG GCCGTTGTAC GAATTGGACC CACACACGTT GTACGTGAAC
TTCGGTTTCT GGGGAACGCT TCCCGTGCTG CCCGGCCGGG GACATGATGC GCGCAACCGG
CTGGTCGAGC AGAAGGTGAC CGAGCTCGGT GGGCGTAAGT CGCTGTACTC GGAGGCCTTC
TACGACGAGC GGACCTTCTG GCGGCTGTAC AACGGCCCGG CATACGAACG CCTCAAGCAC
CGCTACGACC CGCAAGGCCG GCTGCTGGAC CTCTACAGCA AGTGCGTCAA GGCCGAATGA
 
Protein sequence
MVLDNRSASN PPADATPRSR PGDPSANVSE APPNTHADRV AALRTQWDAQ PPDTPIRLAK 
RTSNLFRPRT RTTSPGLDVS SLTHVLDVDP VARTADVEGM VTYEQLVDAT LPHGLMPLVV
PQLKTITVGG AVTGLGIESS SFRNGMPHES VLEMEILTGD GEVVLARPSN EHSELFFGFP
NSYGTLGYAL RLLVELEPVR PYVRLRHLRH SDPRTYFAEL ARHCAEGDAD FVDGTVFGPD
ELYLTLGTFT DEAPATSDYT WLDVYYTSIR ERDIDYLHTR DYLWRWDTDW FWCSRALGVQ
HRLVRLLLGP DRLRSDNYWK IVAFDRRHGV SRRVNRLLGR PQREAVIQDI EVPVDAAADF
LDFLHREVPL SPVWICPVRQ RHPDRQWPLY ELDPHTLYVN FGFWGTLPVL PGRGHDARNR
LVEQKVTELG GRKSLYSEAF YDERTFWRLY NGPAYERLKH RYDPQGRLLD LYSKCVKAE