Gene Svir_08330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08330 
Symbol 
ID8386170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp850090 
End bp850908 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content67% 
IMG OID644974924 
ProductProtein of unknown function (DUF574) 
Protein accessionYP_003132720 
Protein GI257054888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTGC CCCAGCAAGC AGCGGACTCG GGTGGTCCGG ACAGCCCTGT TCTGCCCAAC 
ATCGCTCGCA TCAGGAACTT CTGGCTGAAC GGCAGTCGGC ACAACGACGA CGACCGGGAG
ATGGCCCAGC GGATCGAGCT GTGTGGGCCG CACATCCCGT ATCTCGTCAG AGCGCAACGA
TCGCTCGTCC GACGCCAGGT CCGCTACCTC GTCACCCACG GCATCACCCA GTTCCTCGAC
CTCGGTTCGG GGCTGCCCGA ATCCGACTAC GTGCACCACG TGGCCCAAAG ACTCGATCCG
ACGTGCCGGG TCGTGTACGT GGATGTGGAC GCCTCGATCG AGACCGACAG CAAGGAGTTG
GTGGCGGGCG CCGACAACAC GGCCTTCGTG GTGGCGGACT GCCGTGATGT CGACGGCGTG
CTCGAGCACC CCGAGGTACG CGTGATATGC GACACCTCGC GGCCGTTCGC GGTGCTGATG
ACCGAGCTGT TGCTGCACAT CCCCGACGAG GAGGACCCCG CCGGGCTCGT GGCGTCGTAC
GTCGACGCCA TGCCGTCGGG CAGCTACCTG GCGATCTCGC ATTTCGGCGA GGACGACCGG
GTGTTGGAGG GTTTCCAGAT CTTCGAGGGC CTGCGCTTCG GCCGGTTCCC CGCCGTGAGT
CTGCGCTCCC GGGAACAGGT GGAGAAGCTG TTCGCCGGAC TCGCCCTCGT CGACCCCGGC
GTGGTGCCGG TGCCGCTGTG GCGTCCCGAA CCCGACGACG AGGTACTGCG CAACCCGAGC
GAGGTGCGCA TGTACACGGG CCTGGGGCGC AAGGACTGA
 
Protein sequence
MAVPQQAADS GGPDSPVLPN IARIRNFWLN GSRHNDDDRE MAQRIELCGP HIPYLVRAQR 
SLVRRQVRYL VTHGITQFLD LGSGLPESDY VHHVAQRLDP TCRVVYVDVD ASIETDSKEL
VAGADNTAFV VADCRDVDGV LEHPEVRVIC DTSRPFAVLM TELLLHIPDE EDPAGLVASY
VDAMPSGSYL AISHFGEDDR VLEGFQIFEG LRFGRFPAVS LRSREQVEKL FAGLALVDPG
VVPVPLWRPE PDDEVLRNPS EVRMYTGLGR KD