Gene Svir_08060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_08060 
Symbol 
ID8386143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp826390 
End bp826920 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID644974897 
Producthydrogenase maturation protease 
Protein accessionYP_003132693 
Protein GI257054861 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTGA CGAGTCGAGT GCTCATCGCC GGGATCGGCA ACGTGTTCCA CAGCGACGAC 
GGTTTCGGTG TCGAGGTGAT CTCCCGACTG TCCACTCGCG ACCTACCACC GGAGGCGGTG
GTGGCCGATT ACGGCATCCG GGGCATGCAC CTGGCCTACG AACTGCTGGA CGGCGGGTAC
GAGTTCACGA TCTTCGTCGA CACCATCCAG CGGGGAGGCG AGCCGGGGAC GGTGTACGTG
CTCGACGCCG ATCCGGCCGC GGAGGTCGGT GGGGACGAGC ACACCGACGA GGGACCGGTG
CTCGACGGTC ACGGCATGCA CCCCGCGGCC GTGCTCGCGC TGCTGCGCAG GCTCGGCGGC
ACGCCCGGAC GCGTGTTCGT GGTGGGCTGC GAGCCGTTGA CCGTGGCCGA GGGCATGGGG
TTGAGCGACC CGGTGTCCGC CGCTGTGGAC GAGGCGGCCC GACAGGTGCG TGTCCTCGTC
TCCGACATGT TGGAAAGAGG TGGCACCGAT GTGTCTTGGA ATTCCCGGTG A
 
Protein sequence
MAVTSRVLIA GIGNVFHSDD GFGVEVISRL STRDLPPEAV VADYGIRGMH LAYELLDGGY 
EFTIFVDTIQ RGGEPGTVYV LDADPAAEVG GDEHTDEGPV LDGHGMHPAA VLALLRRLGG
TPGRVFVVGC EPLTVAEGMG LSDPVSAAVD EAARQVRVLV SDMLERGGTD VSWNSR