| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08040 |
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| Symbol | |
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| ID | 8386141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 825001 |
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| End bp | 826143 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974895 |
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| Product | hydrogenase expression/formation protein HypD |
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| Protein accession | YP_003132691 |
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| Protein GI | 257054859 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0409] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00075] hydrogenase expression/formation protein HypD |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGG CGACGATGCG GTTTGTCGAC GAGTACCGCG ACGCGGACAC GGCACGGACA
CTGGCGACTC GGATCGCCGA ACTCTGCGAA CCCGGCAGGG AGTACAAGTT CATGGAGGTG
TGCGGCGGGC ACACCCACAC CATCTACAAG CACGGGATCG CCGACCACCT CCCCGAGCAG
GTCTCACTCG TGCACGGCCC GGGCTGTCCG GTGTGCGTCA TCCCCATGGG CCGGGTCGAC
GACGCCATCC ACCTCGCGAG CCTGCCGGAC GTGATCATGA CGTCGTTCGG CGACATGATG
CGGGTACCCG GCTCGAACGG CACGTTCTTC GACTCCAACG CCGAGGGCAC CGACATCCGC
ATGGTGTACT CGCCGCTGGA CTCGCTGCGC ATCGCGAAAC AGAACCCCGA CAAACACGTG
GTGTTCATGG CGATCGGGTT CGAGACCACC GCCCCGTCCA CGGCGATGAC CCTGCTGCGG
GCCGAACGGG AGGGCATCGA GAACTTCTCG GTGTTCTGCA ACCACGTCAC GATCATCCCC
GGCATCAAGG CCATCCTCGA CTCCCCCGAC CTGCGGCTCG ACGGCTTCCT CGGCCCGGGG
CACGTGTCCA CGGTGATCGG GTGCCGACCG TACGAGTTCG TGCCCCGCGA GTACGGCAAA
CCGCTCGTGG TGGCGGGTTT CGAACCCCTG GACATCCTCC AGTCGGTGTA CTGGCTGCTG
CGACAGCTGC GCGAGGGCCG GTGCGAGGTG GAGAACCAGT ACGCACGGGT GGTGCCGTGG
CAGGGCAACC CGGTGGCGTT GGACGCCATC GCCCGCACGA TGCAGCTGCG CCCGTACTTC
GAATGGCGTG GACTCGGGTT CATCTCGCAT TCGGCGCTGC GGTTGCGCGA CGAGTACGCG
CACTTCGACG CGGAACGGCG GTTCTCCCTG CCCGGGGTAC GGGTGGCCGA TCCGAAGTCG
TGCCAATGCG GGGAGGTGCT CAAAGGCGTG TTGAAGCCGT GGGAGTGCAA GGTGTTCGGC
ACCGCGTGCA CACCGGAGAC ACCGATCGGC ACCTGCATGG TCTCCCCCGA GGGCGCGTGC
GCCGCCTACT ACAACTTCGG CCGGTTCACC CGGCAGCGGC TCAAGGAGGC GAGCACGGTA
TGA
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| Protein sequence | MKAATMRFVD EYRDADTART LATRIAELCE PGREYKFMEV CGGHTHTIYK HGIADHLPEQ
VSLVHGPGCP VCVIPMGRVD DAIHLASLPD VIMTSFGDMM RVPGSNGTFF DSNAEGTDIR
MVYSPLDSLR IAKQNPDKHV VFMAIGFETT APSTAMTLLR AEREGIENFS VFCNHVTIIP
GIKAILDSPD LRLDGFLGPG HVSTVIGCRP YEFVPREYGK PLVVAGFEPL DILQSVYWLL
RQLREGRCEV ENQYARVVPW QGNPVALDAI ARTMQLRPYF EWRGLGFISH SALRLRDEYA
HFDAERRFSL PGVRVADPKS CQCGEVLKGV LKPWECKVFG TACTPETPIG TCMVSPEGAC
AAYYNFGRFT RQRLKEASTV
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