| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_08010 |
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| Symbol | |
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| ID | 8386138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 822782 |
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| End bp | 823603 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644974892 |
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| Product | hydrogenase accessory protein HypB |
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| Protein accession | YP_003132688 |
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| Protein GI | 257054856 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGGAA CATGCGGATG TGACGGCCAG GTGCCCGTAC GAGAGCAGCG CACCGAAGGT
GACTCGGTGC TGGTCGAGCA GGACGTCCTC GCCAAGAACG ACCGGCTCGC CGAGGACAAC
CGCGCCTGGC TGGCCGAGCA CGCGGTGTTC GCGGTGAACC TGATGAGCGC GCCCGGCTCG
GGCAAGACCA CGCTGCTGGA GACCACCGTG CGCGCGCTCG CCGGTGACGT CTTCATCGGT
GTGGTGGAAG GCGACCAGGC CGGTTCCCTC GACGCCGATC GACTCCGGGC GGTCGACTGC
CGCACCGTGC AGGTCAACAC CGGATCGGGC TGCCATCTCG ACGCCGACAT GGTGGCGCGG
GCGTTGCGGG AGCTCGACCC GCCACGCGGG TCCGTGGCGG TGGTGGAGAA CGTCGGCAAC
CTCGTGTGCC CGGCCCTGTT CGACCTCGGC GAGCGACGTC GGGTGGTGCT GGTGTCGGTC
ACCGAGGGCG AGGACAAACC GCTCAAGTAT CCGCACATGT TCCGGGCCGC CGACCTCGTG
GTGCTGACGA AGGCGGATCT GATACCGCAT CTGACGTTCG ACGTCGACCA CTTCGCCCGG
CACCTGCTGC GCGTCAATCC CGCGGCGGAG CTGCTCGTGA CGAGTTGCGT CTCGGGTGAG
GGGCTGGATC AGTGGTTCTC CTGGTTACGG TCCGAACTCG CGTCGGTGTC GACACCGGAC
TCGACCGCCG TGTCCTCGGC GTCCTCGGCC ACCTCCAAGA ACCCGGATTC CCCGGTGTTG
CCCGCGTCCT CTCCGTCGGC CCTGCCCTCG GTCTCCTCGT AA
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| Protein sequence | MCGTCGCDGQ VPVREQRTEG DSVLVEQDVL AKNDRLAEDN RAWLAEHAVF AVNLMSAPGS
GKTTLLETTV RALAGDVFIG VVEGDQAGSL DADRLRAVDC RTVQVNTGSG CHLDADMVAR
ALRELDPPRG SVAVVENVGN LVCPALFDLG ERRRVVLVSV TEGEDKPLKY PHMFRAADLV
VLTKADLIPH LTFDVDHFAR HLLRVNPAAE LLVTSCVSGE GLDQWFSWLR SELASVSTPD
STAVSSASSA TSKNPDSPVL PASSPSALPS VSS
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