| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07830 |
|---|
| Symbol | |
|---|
| ID | 8386120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 808270 |
|---|
| End bp | 809388 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644974876 |
|---|
| Product | cell wall-associated hydrolase, invasion-associated protein |
|---|
| Protein accession | YP_003132673 |
|---|
| Protein GI | 257054841 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGA CGGCGGAAGT CACGAGAGCG GCACTGGATC TGCCCAACCA GTTCGCGCGT
CGCATGCGCA CCGATGACGC GGCGATCGGC GCCGCGATGA GCGGACAGGC CGCGTTGCGC
ACCTCGCTGG ACGGTGTTCG CAGCACGGCG GAGGCGCAGC GTGTGCTGTT GGCGGAGCGG
TCGGCGGGGC ATGCCACGGA CAACGCCGTC GGTACTGCGC AGGCGCTGGA GCAGGAAGTA
CAGGCGTTAC TCGACGAGAG CGTCGAGATC GAGAACGCGG TGGCCGAGGC CGCGGAGGCG
CTCAAGGTGG GCCAGGTCGA GAACGACCGG GTCCGCGAGG AGATCATCCG CGAGATCAGC
AGGACCATGA AGGCCGTCGC GGCGGTCCGG CAGACCCCAC CCGTGCCCAC GGGCGGTCAG
ATCGCGGTGC GGGAACTCAT GGTGGCGCTG CAACAGAAGA TCGCCGAACT GACCGGGGAA
TCCGCCGACA TCAGTGAGCG CACGCTGGCC ACGCTCACCG ACATCGCGAG CAGGCTCGGT
TCCGACAGCG GGGCCACCAG CCTCAGCAGT GCGAGTACCG AGGTCGCGTC GTCGTTCAAC
TCGCAGGGAG CCGGCGGGGG CGGCGGCGGA GGTGGCGGCA CCGGTGGCGG CGGGGGCGGC
GGTGGCGGTG GCGTGGTGAT GAAACCGCGT CTGCCCGTGG CGATCCCGCC GCAGCCCGGC
ACCGGGGTCA AGATCAACCT GCCGAACGGT TCGACGGTGG AGGCCCCCAA CGAGACGGCG
GCGAAGGCGG TGCGCGCCGC GCTGTCGCAG CTCGGCGTTC CGTACGTCTG GGGCGGCACC
GCGCGCGGTG TGGGCCTGGA CTGCAGTGGG CTCACCATGA CGTCGTACCT CGAGGCGGGA
CTGGAGATCC CCCGGTTGGC GCGGGATCAG GCCGTGGGGG CGGAGGTTCC GTCACAGGAT
CAGTTGTTGC CCGGGGACCT CGTGGTGTGG TCGGGGCATG TCGCGATGGT GATCGGGGAC
GGCCTCATGA TCGAGGCGGG GGACCCGGTG AGTATCAACC CGATCCGCAC GACGAACGCG
GGACAGCAGT TCATCGGGTT CTTCCGGCCG ACCGGATGA
|
|---|
| Protein sequence | MTETAEVTRA ALDLPNQFAR RMRTDDAAIG AAMSGQAALR TSLDGVRSTA EAQRVLLAER
SAGHATDNAV GTAQALEQEV QALLDESVEI ENAVAEAAEA LKVGQVENDR VREEIIREIS
RTMKAVAAVR QTPPVPTGGQ IAVRELMVAL QQKIAELTGE SADISERTLA TLTDIASRLG
SDSGATSLSS ASTEVASSFN SQGAGGGGGG GGGTGGGGGG GGGGVVMKPR LPVAIPPQPG
TGVKINLPNG STVEAPNETA AKAVRAALSQ LGVPYVWGGT ARGVGLDCSG LTMTSYLEAG
LEIPRLARDQ AVGAEVPSQD QLLPGDLVVW SGHVAMVIGD GLMIEAGDPV SINPIRTTNA
GQQFIGFFRP TG
|
|---|
| |