| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07680 |
|---|
| Symbol | |
|---|
| ID | 8386106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 795104 |
|---|
| End bp | 795604 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644974862 |
|---|
| Product | predicted transcriptional regulator |
|---|
| Protein accession | YP_003132659 |
|---|
| Protein GI | 257054827 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGATT TGAACGCAAC TGCCGCAGCA TTACTAGGTT TGCTCCACGA TGGTCCCGCG
ACCGGTGGTC AGCTCGTCGC GGCGGCTGAG GAACGATTCG GCACGTTCTT CAGCGTCACG
AGGAGCCAGG TCTACCGGGA GCTCCCAGCG CTGCACAAGG AAGGGTATGT GCGGCTCGGG
AAGCAGGGGC CCCGATCCAG CCAGCAATAT GTCCTCACAG CAGCGGGGAA GAAGGCCTTC
AAGGCCTGGC TGATGAGCCC GTCCTCGCCT GACCACCTGC GGAGTCCGCT GATTCTCAGG
ATCGTGAACT CCGGTGTGCT CACGCCGAAG CAGCGCGCCA ACCTGTTCGC CACCGCCAGG
GAGACCTACA AGGCGGAATT GGACGAGGCG CGGGCCGCGG TGAAGGCCGC GACCGATCCG
GTGGAGAAGG CGGTCGCCGA GTTCGGTCAA GCACATGCCA GGGCCGCGCT GAAGCTGCTG
GACACCGTGT CGTCGGACTG A
|
|---|
| Protein sequence | MSDLNATAAA LLGLLHDGPA TGGQLVAAAE ERFGTFFSVT RSQVYRELPA LHKEGYVRLG
KQGPRSSQQY VLTAAGKKAF KAWLMSPSSP DHLRSPLILR IVNSGVLTPK QRANLFATAR
ETYKAELDEA RAAVKAATDP VEKAVAEFGQ AHARAALKLL DTVSSD
|
|---|
| |