Gene Svir_07630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07630 
Symbol 
ID8386101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp788302 
End bp789714 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content70% 
IMG OID644974857 
Producthypothetical protein 
Protein accessionYP_003132655 
Protein GI257054823 
COG category[S] Function unknown 
COG ID[COG5282] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03624] putative hydrolase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.583955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC CACCGTTCGG CTTCGGATTC CCCGACCCCG ACAAGCGTCC CGACGACGAG 
TCGTCGGGCG CCGGCGGGCC GTCGGGCTCG GGTGCCGACC CCTTCCAGCA GCTGGGGCAG
ATGCTCAGCC AACTCGGGCA AATGCTCAGC CAAGCCGGTA GCTCCTCGGG CCCGGTGAAC
TACGACCTGG CCAAGCAGAT CGCCCTGCAA CGTCTCGGCT CCGAGGGGCA GCTGGGGTTC
GCGGCCGGAG ATCGAACGGG CGAAGGAGCG GTGCGGGATT CGGCGCGCCT CGCGGAGCTG
TGGCTGGACG AAGCGACCAT CCTCCCTACC GGCGCCTCCG TCACCGCGGC GTGGACGGCC
CGCGATTGGA TCGAGAAGAC CCTCCCCACG TGGCAGCGAC TCTGCGATCC GGTCGCCAAG
CAGGTGTCCT CCGCGTGGAT GCAAGCACTT CCCGAGGAAG CCAAGCAGGC GGCGGGCCCA
CTGTTGTCCA TGGTCGGCCA GATGGGCGGC ATGGCGTTCG GCTCCCAGCT CGGCAACGCA
CTGGCGGGCC TCGCCTCGGA GGTGTTGACC TCGACCGACA TCGGATTGCC GCTCGGCCCC
GAGTCCACCT CGGCACTACT GCCCAAGAAC ATCGAGAAGT TCACCGAGGG GCTGGAGCGA
CCCGCCAGCG AGGTGCTCGT GTTCCTGGCG GCACGTGAGG CCGCACACCA GCGCCTGTTC
GCCCACGTTC CGTGGTTGCG GCAGCGACTG CTCGCGACGG TGGAGGAGTT CGCCTCCGGG
ATCACGGTCG ACACCTCGGC TTTGGAGCAG CTCGCCGGTC AGATCGATCC GGCCAATCCG
GCGAGCATCG AGCAGGTCAT GTCGTCAGGG CTGCTCGAGC CTCAGACGAC GCCGGAGCAG
AAGGCCGCGC TGGGTCGCCT CGAGACGTTG CTCGCGCTGG TGGAGGGCTG GGTGGACGTC
GTGGTCGCCG AGGCCACCGG CGATCGGCTG CCCGGTGCGG AGGCCTTGCG GGAAACGCTG
CGTCGACGGC GGGCGACCGG AGGCCCCGCC GAACAGACGT TCGCGACACT CGTCGGCCTC
GAGCTGCGGC CTCGTCGGAT GCGTTCCGCC TCCGCCCTGT GGAAGCTCGT GGGTGACCGA
CACGGCATGA AGTCCCGGGA CACGCTGTGG TCACACCCCG ACCTCATGCC GACGGCCGAG
GACCTCGACG ATCCGATCGG CTTCGCCGAG CGGCTCGGTG ACACCGGTGC TTTGGGGGAG
GGAATCGACC CGATCGCCGA GCTGGAACGC ACCGAGCGGG CCGAGGGCGA CAGCGGCACC
GTCGACAAGG ACAAGGACGA CGGTGGCAAG GAAGGCGAGA CCGACGAGGA CGGTGGGGAA
GGCGCCGCCG GGCGGGAACC CGGCGACGCC TGA
 
Protein sequence
MSNPPFGFGF PDPDKRPDDE SSGAGGPSGS GADPFQQLGQ MLSQLGQMLS QAGSSSGPVN 
YDLAKQIALQ RLGSEGQLGF AAGDRTGEGA VRDSARLAEL WLDEATILPT GASVTAAWTA
RDWIEKTLPT WQRLCDPVAK QVSSAWMQAL PEEAKQAAGP LLSMVGQMGG MAFGSQLGNA
LAGLASEVLT STDIGLPLGP ESTSALLPKN IEKFTEGLER PASEVLVFLA AREAAHQRLF
AHVPWLRQRL LATVEEFASG ITVDTSALEQ LAGQIDPANP ASIEQVMSSG LLEPQTTPEQ
KAALGRLETL LALVEGWVDV VVAEATGDRL PGAEALRETL RRRRATGGPA EQTFATLVGL
ELRPRRMRSA SALWKLVGDR HGMKSRDTLW SHPDLMPTAE DLDDPIGFAE RLGDTGALGE
GIDPIAELER TERAEGDSGT VDKDKDDGGK EGETDEDGGE GAAGREPGDA