Gene Svir_07580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07580 
Symbol 
ID8386096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp783910 
End bp784806 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content67% 
IMG OID644974853 
Producthypothetical protein 
Protein accessionYP_003132651 
Protein GI257054819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.612325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.719252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTCAG TCGCACAGCT TCGGGCACTG GGCTTCCACC CGAGCACGAT CACGAAGCGC 
TGCCGTCCCG GTGGTCCGTG GCGTCGGCTC GCGACGGGAG TCGTCATGCT CGGCACCGGA
GAGCCGACCC GCTATCAGCT ACTGCAAGCC GCCATCGCGT ATCTCGGGAG CGGCAGCGTG
ATCACAGGTG TGGACGCGCT GCGGATACAC GGCGTACAGC TGCCCGTTCC CCGCTTCGTC
CACACCCTCG TGTCTGCACA ACGTCGGTTG ACACCCCCTG CGTTCGTGGC CCTCGAACGT
ACGGCGCGGA TGCCGACGCC ACTGGTGCAG TCCGAATTGC CGTTCGCCCC ACCGGCACGA
GCGGTGCTCG ACGCCGCTCG ACGCGAGAAC GACCCTGACC GCCTGCGGTC TTTACTGACC
GTCCCGGTGC AGGAGGGTCT GTGTACGCTC GACGAACTCA TCACCGAACT CGACCAGGGC
AATCAACGCG GCTCCGCGGC TGTCCGCATC CAATTGAGAG CGTTGAGGCA CACGATCGAA
GACAGGTTGC GCCGAGCGGC TCGATACCTT GCGCGTCGCT GTCCGCTGCC ACCGCCACGC
TGGGACGTGA CGATCACCGA TTCGACGGGA CGACGTCTCG GCATGGTCGA CGCATGGTGG
GACGACGTCG GCATGGGGTG GTTGCTGAAC GCGCCGTCGG TCGGGTCACA GGGCCCGGAG
GAGCAACGGG ACGAACTCGC CCTGACGGCG AAGGGCGTGG TGCTGGTGCG CACCGCACCT
TCGATGCTGC ATCACCACGG TGACGTCGTC GCCACCGAAC TGGTTCGCGC CTTCCGCCAG
GCAGCGACAC GGCCCCGTCC CCCTGTGCTG TCCGAAGCAC GCTGTGCCGC CCTCTGA
 
Protein sequence
MLSVAQLRAL GFHPSTITKR CRPGGPWRRL ATGVVMLGTG EPTRYQLLQA AIAYLGSGSV 
ITGVDALRIH GVQLPVPRFV HTLVSAQRRL TPPAFVALER TARMPTPLVQ SELPFAPPAR
AVLDAARREN DPDRLRSLLT VPVQEGLCTL DELITELDQG NQRGSAAVRI QLRALRHTIE
DRLRRAARYL ARRCPLPPPR WDVTITDSTG RRLGMVDAWW DDVGMGWLLN APSVGSQGPE
EQRDELALTA KGVVLVRTAP SMLHHHGDVV ATELVRAFRQ AATRPRPPVL SEARCAAL