| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07500 |
|---|
| Symbol | |
|---|
| ID | 8386088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 776718 |
|---|
| End bp | 778142 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644974845 |
|---|
| Product | L-glutamine synthetase |
|---|
| Protein accession | YP_003132643 |
|---|
| Protein GI | 257054811 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.682112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.512879 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCACCA CTCCAGACGA TGTCCTCCGT CTGATCACGG ACGAGGGCGT GCAGTTTGTC
GACGTGAGGT TTTGTGACCT GCCGGGCGTC ATGCAGCACT TCACCGTCCC CGCGTCGACG
CTTGACGCGG ACGTGTTCGA GGAGGGACTC GCGTTCGACG GGTCGTCGAT CCGTGGCTTC
CAATTGATCC ACGAGTCCGA CATGCTGTTG CTTCCCGACC CCGCCACCGC CCGTATCGAT
CCGTTCCGCA AACACAAGAC GCTGTCGCTG AACTTCTTCG TGCACGACCC GTTCACCCGG
GAGCCGTACA GCCGCGACCC ACGGAACATC GCGCGTAAGG CCGAGCAGTA CATCGCCGAG
ACCGGTATCG CCGACACGGC GTTCTTCGGC GCCGAAGCGG AGTTCTACAT CTTCGACTCG
GTGCGCTTCG ACTACTCCGA GCACGCGGCC TTCCACGAGA TCGACTCGAT CGAAGGCTGG
TGGAACACCG GCCGGGAGGA GGAAGGCGGG AACAAGGGCT ACAAGACCAA ATTCAAGGGT
GGCTATTTCC CGGTGCCTCC GGTGGACCAC TACGCCGATC TGCGCGACGA CATCTCGCGA
ACCCTGATCG AATCAGGGTT CGTCCTGGAA CGCGCTCACC ACGAGGTGGG CACCGCAGGA
CAAACCGAGA TCAACTACAA GTTCAACACT CTGTTGCACG CGGCCGACGA TCTGCAACTG
TTCAAGTACA TCGTCAAGAA CACGGCTTTC GCCGCGGGTA AAACCGCGAC CTTCATGCCG
AAACCGTTGT TCGGGGACAA CGGCTCCGGT ATGCACTGCC ATCAGTCCCT GTGGAAGGAC
GGGGAACCGT TGTTCTACGA CGAGTCCGGC TATGCGGGCT TGTCGGACAC GGCTCGGTAC
TACATCGGTG GCATTCTGAC GCACGCGCCG AGTCTGCTGG CGTTCACCAA CCCGACGATC
AATTCCTATC GCCGGTTGGT GCCGGGCTAC GAGGCGCCGG TGAGCCTGGT GTATTCACAA
CGGAACCGCT CGGCCTGTGT TCGTATCCCG ATCACCGGCA GCAATGCGAA GGCCAAGCGC
ATCGAGTTCC GTTGTCCTGA TTCGTCGGGG AACCCGTATC TGGCGTTCGC GGCGATGGTG
ATGGCCGGTC TCGACGGCAT CAAGAACAAG ATCGAGCCGC CGGAACCCAT CGACAAGGAC
CTCTACGAGT TGCCCCCCGA GGAGGCCAAG AACGTCAAGC TGGTGCCGGG CGACCTGGGT
ACCGCGCTCG ACGCGCTGGA ATCCAACCAC GACTTCCTGC TGGAAGGCGG CGTGTTCACG
TCGGATGTGA TCGAGACGTG GATCTCGTAC AAGCGGGAGA ACGAGATCGA AGCGCTGCGA
CTGCGCCCCC ACCCCTACGA ATTCGCCCTG TACTACGACG TGTGA
|
|---|
| Protein sequence | MSTTPDDVLR LITDEGVQFV DVRFCDLPGV MQHFTVPAST LDADVFEEGL AFDGSSIRGF
QLIHESDMLL LPDPATARID PFRKHKTLSL NFFVHDPFTR EPYSRDPRNI ARKAEQYIAE
TGIADTAFFG AEAEFYIFDS VRFDYSEHAA FHEIDSIEGW WNTGREEEGG NKGYKTKFKG
GYFPVPPVDH YADLRDDISR TLIESGFVLE RAHHEVGTAG QTEINYKFNT LLHAADDLQL
FKYIVKNTAF AAGKTATFMP KPLFGDNGSG MHCHQSLWKD GEPLFYDESG YAGLSDTARY
YIGGILTHAP SLLAFTNPTI NSYRRLVPGY EAPVSLVYSQ RNRSACVRIP ITGSNAKAKR
IEFRCPDSSG NPYLAFAAMV MAGLDGIKNK IEPPEPIDKD LYELPPEEAK NVKLVPGDLG
TALDALESNH DFLLEGGVFT SDVIETWISY KRENEIEALR LRPHPYEFAL YYDV
|
|---|
| |