Gene Svir_07450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07450 
Symbol 
ID8386083 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp768898 
End bp772027 
Gene Length3130 bp 
Protein Length 
Translation table 
GC content58% 
IMG OID644974840 
Product23S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.982491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TGGTCAAGTT GTGTAGGGCA CACGGTGGAT GTCTTGGCAC CAGGGGCCGA TGAAGGACGT 
GGGAGGCTGC GATAAGCCTC GGGGAGCTGC CAACCGAGCT GTGATCCGAG GATGTCCGAA
TGGGGTAACC CGGCACCCGT GATGGGGTGT CACCCGCCGG TGAATATATA GCCGGTGTGG
AGGGAACGCG GGGAAGTGAA ACATCTCAGT ACCCGTAGGA AGAGAAAACA ACCGTGATTC
CGTGAGTAGT GGCGAGCGAA AGCGGAAGAG GCTAAACCGT GCACATGGTA AAGCTGTCAG
GCGTTGTGTG TGCGGGGTTG TGGGAGCCAC TGTCCAGTAG CTGACACTGC TGGGGATGCC
GCGTGTGGTT AGCGGAACCG TCTGGAACGG CGGACCGGAG TGGGTGAGAG TCCCGTACGC
GAAAACTGCA TTGTGGTGTC TTAGTGGTTT CCCGAGTAGC AGCGAGCCCG TGGAATTCGC
TGTGAATCTG CCGGGACCAC CCGGTAAGCC TAAATACTTC CTGGTGACCG ATAGCGGATC
AGTACCGTGA GGGAAAGATG AAAAGTACCC CGGGAGGGGA GTGAAAGAGT ACCTGAAACC
GTGTGCCTGC AAGCCGTCAG AGCCTTCGGG TGATGGCGTG CCTTTTGAAG AATGAGCCTG
CGAGTTAGTG CTGCGTGGCG AGGTTAACCC GTGTGGGGTA GCCGGAGCGA AAGCGAGTCT
GAATAGGGCG TTGAGTCGCG TGGTCTAGAC CCGAAGCGGG GTGATCTACC CATGGCCAGG
GTGAAGCGCC GGTAAGACGG CGTGGAGGCC CGAACCCACC AGGGTTGAAA ACCTGGGGGA
TGAGCTGTGG GTAGGGGTGA AAGGCCAATC AAACTCCGTG ATAGCTGGTT CTCCCCGAAA
TGCATTTAGG TGCAGCGTCG TGTGTTTCAC ACCTGGGGTA GAGCGACTGG ATGGCCTAGG
GGGCTTACCG GCTTACCGAA GTCAACCAAA CTCCGAATAC AGGTGTGTGA GAGCACGGCA
GTGAGACGGC GGGGGATAAG CTTCGTCGTC GAGAGGGAAA CAGCCCAGAA CACCAGCTAA
GGCCCCTAAG TGTGTGCTCA GTGGGAAAGG ATGTGGAGTC GCTGAGACAA CCAGGAGGTT
GGCTTAGAAG CAGCCATCCT TGAAAGAGTG CGTAATAGCT CACTGGTCGA GTGGTTCTGC
GCCGATAATG TAGCGGGGCT AAGCACACCG CCGAAGCTGT GTCATTCACA CAGGTGATCG
GCCCTGGTCC TTCGGGGTTG GGGTCCAGTC GTGTGGATGG GTAGGGGAGC GTCCTGTACC
CATAGAAGCC GTCGGGTGAC CGAGCGGTGG AGGGTGCGGG AGTGAGAATG CAGGCATGAG
TAGCGAAAGC AGAGTGAGAA TCTCTGCCGC CGGATGACCA AGGGTTCCTG GGCCAGGTTG
TTCCGCCCAG GGTAAGTCGG GACCTAAGGC GAGGCCGTCA GGCGTAGTCG ATGGACAACG
GGTTGATATT CCCGTACCCG CGTGTGCGCG TCCCTGGCGA GGCAGGTGAG ACTAACCACC
CGCTCTGCGC GTACTCCTTC GGGAGTGTGT GTGGGGTGCG TGGGACCTGA TCCTGTAGTA
GCCAAGCGAT GGGGTGACGC AGGAAGGTAG CCCCGCCAGT CAGTGGTGAT ACTGGTGTAA
GCGTGTGGCC CGTCCGATAG GCAAATCCGT CGGACTGTCC TTCGAGGACA AGGGTGAGGC
GTGATGCATA GCCGTTGAGG CGAAGTAGGG TGATCCTCTG CTGCCGAGAA AAGCCTCTAG
CGAGTGCGCA CGTGGCCCGT ACCCGAAACC GACACAGGTG GTCAGGTAGA GAATACCAAG
GCGATCGGGT GAACTGTGGT TAAGGAACTC GGCAAATTGC CCCCGTAACT TTGGGAGAAG
GGGGGCCAAA GCGCCTGAAG CCCCTTGCGG GCTAGGGCGA GTTGGCCGCA GAGACCAGCG
GAAAGCGACT GTTTACTAAA AACACAGGTC CATGCGAAGA CGTAAGTCGA TGTATATGGA
CTGACGCCTG CCCGGTGCTG GAACGTTAAG AGGACCGGTT AGCCCCCTTT CGGGGGGGTG
AAGCCGAGAA TTTAAGCGCC AGTAAACGGC GGTGGTAACT ATAACCATCC TAAGGTAGCG
AAATTCCTTG TCGGGTAAGT TCCGACCTGC ACGAATGGCG TAACGACTTT CCGGCTGTCT
CAACCACAGG CCCGGCGAAA TTGCACTACG AGTAAAGATG CTCGTTTCGC GCGGCAGGAC
GGAAAGACCC CGGGACCTTT ACTACAGCTT GGTATTGGTT CTCGGTTCGG CTTGTGTAGG
ATAGGTGGGA GACTGGGAAG CCCGCACGCC AGTGTGGGTG GAGTCGCCGT TGAAATACCA
CTCTGGCCGG ATTGGGAATC TAACCTCGGA CCGTGATCCG GTTCAGGGAC AGTGCCTGGT
GGGTAGTTTA ACTGGGGCGG TTGCCTCCTA AAAGGTAACG GAGGCGCCCA AAGGTTCCCT
CAGCCTGGTT GGCAATCAGG TGTCGAGTGT AAGTGCACAA GGGAGCTTGA CTGTGAGACC
GACGGGTCGA GCAGGGACGA AAGTCGGGAC TAGTGATCCG GCACCACCTG GTGGAAGGGG
TGTCGCTCAA CGGATAAAAG GTACCCCGGG GATAACAGGC TGATCTTGCC CAAGAGTCCA
TATCGACGGC ATGGTTTGGC ACCTCGATGT CGGCTCGTCG CATCCTGGGG CCGGAGTAGG
TCCCAAGGGT TGGGCTGTTC GCCCATTAAA GCGGCACGCG AGCTGGGTTT AGAACGTCGT
GAGACAGTTC GGTCCCTATC CGCCGCGCGC GTTGGAGACT TGAGGAAAGC TGTCCCTAGT
ACGAGAGGAC CGGGACGGAC GAACCTCTGG TATGCCAGTT GTCCCGCCAG GGGCATGGCT
GGTTAGCTAC GTTCGGAAAG GATAACCGCT GAAGGCATCT AAGCGGGAAG CCTGTTCCAA
GATGAGGTCT CCCACCACCT TCGAGTGGGT AAGGCCCCCC AGAGATGATG GGGTTGATAG
GCCAGACATG GAAGCGCAGC AATGCGTGCT GGAGTGGACT GGTACTAATC GGCCGAGGGC
TTGACCACAA
 
Protein sequence