| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07430 |
|---|
| Symbol | |
|---|
| ID | 8386081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 765501 |
|---|
| End bp | 766844 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644974838 |
|---|
| Product | L-glutamine synthetase |
|---|
| Protein accession | YP_003132639 |
|---|
| Protein GI | 257054807 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.716798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGCC AGCAGGAATT CGTGCTGCGC ACGCTGGAGG AGCGGAACAT CCGCTTCGTG
CGGCTGTGGT TCACCGACGT CCTGGGTTTC CTGAAGTCGG TCGCCGTGGC CCCCGCCGAA
CTCGAGGGGG CGTTTTCCGA GGGCATCGGG TTCGACGGTT CGGCGATCGA GGGCTTCGCG
CGGGTGTACG AGTCCGACAT GATCGCCAAG CCCGACCCCT CCACGTTCCA GGTGTTGCCG
TGGGAGACCG AGGACGGCGA GCGTTATTCG GCGCGGATGT TCTGCGACAT CGCGATGCCG
GACGGGTCAC CGTCGTGGGC CGATCCACGT CATGTGTTGC GGCGCCAGCT GGCCAAGGCC
AGTGAGGCGG GTTTCACGTG CTATGTGCAT CCGGAGATCG AGTTCTTCCT CCTGGCGAAT
CTGCCCATGG ACGGGCGGGA ACCCGAACCC GCCGACAACG GCGGCTACTT CGACCAGGCC
AGCCATGCGA CGGCCACCCA TTTCCGACGC CATGCCATCG AGGCCTTGGA GGAGATGGGG
ATCTCGGTCG AGTTCTCCCA CCACGAGGGC GCGCCCGGTC AGCAGGAGAT CGATCTGCGT
TACGCGGACG CGCTGACCAT GGCCGACAAC GTGATGACGT TCCGCTACGT CATCAAGGAG
GTCGCGCTCA TGCAGGGTGT GCGTGCCACC TTCATGCCCA AACCGTTCAG CAATCAGCCG
GGCTCGGGCA TGCACACGCA TGTGTCGCTG TTCGAGGGCG AGCGCAACGC GTTCCACAGT
CCGGAGGATC CGTACGAGTT GTCTGCCACC GGCAAGGCGT TCGTCGCCGG GCTGTTGCAC
CATGCGCGGG AGATCTCCGC GGTCACGAAT CAGTGGGTGA ACTCGTACAA GCGGCTCATC
CAGGGTGGTG AGGCGCCGAC GACGGTTTCG TGGGGCAGGG CCAACCGTTC GGCGCTGGTG
CGGGTGCCCA TGTACTCGCC GGGGAAGGCG TCGTCGTGCC GCGTGGAGAT CCGTACGCCG
GATTCGGCGT GCAATCCGTA CTTGGCGTAC TCGGTGATCC TCGCCGCCGG ACTGAAGGGC
ATCGAGGAGG GGTACGAACT GCCCCCGCCC GCTGAGGACA ACATCTGGAC CCTGTCCGAC
GCCGAACGCA AGGCGGCGGG ATATCCGGAG CTGCCGCAGA ACCTGGGTGA GGCGTTGGGG
GAGATGGAGC GCTCCGAGCT GTTGCCCGAG GCGCTCGGCG AGCACGTCTA CGACTTCTTC
CTCCGCAACA AGCGGGTCGA GTGGGACAAC TACCGCAGTG AGGTGACGCC GTACGAGCTC
CGGACGCTGC TTCCGGTGCT TTGA
|
|---|
| Protein sequence | MDRQQEFVLR TLEERNIRFV RLWFTDVLGF LKSVAVAPAE LEGAFSEGIG FDGSAIEGFA
RVYESDMIAK PDPSTFQVLP WETEDGERYS ARMFCDIAMP DGSPSWADPR HVLRRQLAKA
SEAGFTCYVH PEIEFFLLAN LPMDGREPEP ADNGGYFDQA SHATATHFRR HAIEALEEMG
ISVEFSHHEG APGQQEIDLR YADALTMADN VMTFRYVIKE VALMQGVRAT FMPKPFSNQP
GSGMHTHVSL FEGERNAFHS PEDPYELSAT GKAFVAGLLH HAREISAVTN QWVNSYKRLI
QGGEAPTTVS WGRANRSALV RVPMYSPGKA SSCRVEIRTP DSACNPYLAY SVILAAGLKG
IEEGYELPPP AEDNIWTLSD AERKAAGYPE LPQNLGEALG EMERSELLPE ALGEHVYDFF
LRNKRVEWDN YRSEVTPYEL RTLLPVL
|
|---|
| |