Gene Svir_07410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_07410 
Symbol 
ID8386079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp763076 
End bp764653 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content67% 
IMG OID644974836 
Productalpha/beta hydrolase family protein 
Protein accessionYP_003132637 
Protein GI257054805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACCA GGAAACGCTA CCTGTCATTG GCGGCGGGGC TCGTCCTTCT TTCGTCGGTG 
GCCGCGTGTT CGGGTTCGGA CGGCGCCGAA GAGCCGACGG TACCCGCGGG GCCCGTGCCC
GAGGGCCTCG AGGAGTTCTA CGCCCAACGG CTGGAGTGGG GGGACTGCGA GCCGTACGCC
GACAACGCGC TGGCTCAGCA GGCCTTCTCC GGTGAGGGAT TGGAATGCGC GAGGCTCACC
GTGCCGTTGT CGTACGACGC CCCGCAGGGC AAGACCATCA CCGTCGGGTT GCTGCGTAAG
CAGGCGAGCG AGCCCGATCA GCGGATCGGC TCACTGATCA TGAATCCGGG AGGGCCGGGT
GGTTCGGGGA TGATCGCGGC GGCCCAGCTT TCGGGCACGG TCTCCGGTAC CGAGCTCGGC
AAACGATTCG ATCTCGTGGG TTTCGACCCG AGAGGCATCG GGGCCAGCGA GCCGGTGATC
GAATGCCGCA CCGACGCCGA GATGGACGCC GAGCGTGCCG ACCTCAGCAG TATGGACGGG
GTCAACGACG TCGCCGATGC CGAACGGGAC GCCAAGGAAT TCGCTCAGGC GTGTGCCGAA
CGCACCGAAC ACGGCGAGGA GATGCTCGCC AATCTCGGTA CCCGGGACGT GGTGCGGGAC
ATCGACGTCA TGCGTTCCGC GCTCGGGGAC GAGAAACTGA CCTACCTGGG CTATTCCTAC
GGAACACGGA TCGGCTACAC CTACGCCGAG ACCTTCCCCG GCAACGTTCG CGCGTTGCTG
CTCGACGGCG CGATCGATCC CGAACAGGAC ATGTTGGAGT CCTTGATCGG ACAGGCCGAG
GGCTTCGCCA ACACCTTCGA CAGGTTCGTG GAGTGGTGCG TGGCCCGGGA CGACTGTGCG
CTCGGCCGGG ACAAGGCCGA GGCGGTGGGG GCGTACCAGG ACCTCGTCAG ACCGCTGCTG
GATGACCCCG TGACGCTTCC CGACGGTCGG ACCCTGACAT ACAACGACGC AACCACCGGC
ACCGTGGCGG CGCTCTACAG CCAGCAGCTT TGGCCCACGC TCAACCAGGG CTTGAACGGA
TTGCGGCAGG ACAACGGCAT CATGTTGATG GCCTTGGCCG ACTCCTACTA CGAGCGCGGA
CCCGATGGCA AGTACTCCTC CACGTATGAA GGCCTGATCG CCATCCGGTG CGTCGACGAC
CCGCCCGTGA CCGATCAGGC GAAGATCGAG GAAGCCCAGG CGGAGTACCT GGAGAAGGCC
GAGTTCCTCG ACCCTGGACT ACCGCCGTCG TCGGCCAGGG ACGCGTGTGC GTTCTGGCCG
GTGGAGCACA CGTCCGAACC TCACTTGCCC GACGTCGACG GCATCCCGCC GGCGTTGGTG
ATCTCGTCGA CCGACGACCC GGCCACCCCG TACCAGGCGG GGGTCAATCT CGCCAAGGCT
TTGGGCGGCA GGCTGCTCAC GTTCGAAGGT GCCCAGCACA CGGCGTTCCT GACGGCGGGC
GACCGGTGCG TCGACGAGGC CGGTGTGGCC TATCTGGTGG ACGGGGAACT GCCGCCCGAG
GGCACTCGCT GCGGTTGA
 
Protein sequence
MRTRKRYLSL AAGLVLLSSV AACSGSDGAE EPTVPAGPVP EGLEEFYAQR LEWGDCEPYA 
DNALAQQAFS GEGLECARLT VPLSYDAPQG KTITVGLLRK QASEPDQRIG SLIMNPGGPG
GSGMIAAAQL SGTVSGTELG KRFDLVGFDP RGIGASEPVI ECRTDAEMDA ERADLSSMDG
VNDVADAERD AKEFAQACAE RTEHGEEMLA NLGTRDVVRD IDVMRSALGD EKLTYLGYSY
GTRIGYTYAE TFPGNVRALL LDGAIDPEQD MLESLIGQAE GFANTFDRFV EWCVARDDCA
LGRDKAEAVG AYQDLVRPLL DDPVTLPDGR TLTYNDATTG TVAALYSQQL WPTLNQGLNG
LRQDNGIMLM ALADSYYERG PDGKYSSTYE GLIAIRCVDD PPVTDQAKIE EAQAEYLEKA
EFLDPGLPPS SARDACAFWP VEHTSEPHLP DVDGIPPALV ISSTDDPATP YQAGVNLAKA
LGGRLLTFEG AQHTAFLTAG DRCVDEAGVA YLVDGELPPE GTRCG