| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07000 |
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| Symbol | |
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| ID | 8386038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 714238 |
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| End bp | 715437 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974797 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_003132598 |
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| Protein GI | 257054766 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.126563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTACT ACCGTCGAGT GGGTTACGTC CCACCGAAGC GGCACACGCA GCACCGCGAC
GAGAACGGCA ATCTCTACTA CGAGGAGCTC ATGGGCGAGG AGGGCTTCTC GTCCGACTCC
TCGCTGCTCT ATCACCGCCA CCTTCCCTCG GCGATCGTCG ACTCCCAGGT GTGGGAGTTG
CCGGACCAGA CGACCACGCC AAACCATCCG TTGCGGCCCC GTCATTTGAG GCTGCACGAC
CTGTTCCCCG GCGACAGCTG GAAGGACGTC GACGTGGTGA CCGGACGTCG GCTGATCCTC
GGCAACGCCG ACGTGCGCAT CTCGTACGTG GTGGCGGGCA AGGAGTCGCC GCTGTACCGC
AACGGGCTCG GCGACGAGAT CGTCTACGTC GAGTCGGGTG ACGCGGTGGT GGAGACCGTG
TTCGGTGCCT TGAAGGCGAC CGCCGGCGAC TACGTGATCC TCCCGATGTC CACGACGCAC
CGCTGGGTGC CGCAGGGCGA AGAGCCGTTG CGGGCGTACG CGATCGAGGC GAACAGCCAC
GTCGCGCCGC CGAAGCGCTA CCTGTCCCGG TACGGGCAGT TGCTGGAGCA CGCGCCTTAC
TGCGAGCGCG ACCTGCACGG GCCGACGGAG GTGCTGATCC GGGAGGGGAC GGACGTCGAG
GTGCTGCTCA AGCACCGTGG CCCCGGCGGG GTCGTGGGCA CCCGCCTGGT GTACCCGTAC
CACCCGTTCG ACGTCGTCGG CTGGGACGGC TGCCTGTATC CGTACACGTT CAGCATCCAC
GACTTCGAAC CCATCACCGG TCGCGTGCAC CAGCCGCCAC CCGTGCACCA GGTGTTCGAG
GGGCACAACT TCGTGGTGTG CAACTTCGTG CCGCGCAAGG TGGACTACCA CCCACAGGCC
ATCCCGGTGC CCTACTACCA CTCCAATGTG GACTCCGACG AGATCATGTT CTACTGCGGC
GGTGACTACG AGGCCCGGAA GGGCTCGGGC ATCGGCCAGG GCTCGGTCTC GATCCACCCG
GGTGGCCACG CGCACGGTCC GCAGCCCGGC GCGTACGAGC GCAGCATCGG GGTGGAGTTC
TTCGACGAGC TGGCCGTGAT GGTCGACACC TTCCGCCCGC TCGAACTCGG TGAGGGGGCG
TTGGCCTGCG AGGACCCGAA CTACGCGTGG ACCTGGGCCG GGCGGGGGCC GAAGCAATGA
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| Protein sequence | MAYYRRVGYV PPKRHTQHRD ENGNLYYEEL MGEEGFSSDS SLLYHRHLPS AIVDSQVWEL
PDQTTTPNHP LRPRHLRLHD LFPGDSWKDV DVVTGRRLIL GNADVRISYV VAGKESPLYR
NGLGDEIVYV ESGDAVVETV FGALKATAGD YVILPMSTTH RWVPQGEEPL RAYAIEANSH
VAPPKRYLSR YGQLLEHAPY CERDLHGPTE VLIREGTDVE VLLKHRGPGG VVGTRLVYPY
HPFDVVGWDG CLYPYTFSIH DFEPITGRVH QPPPVHQVFE GHNFVVCNFV PRKVDYHPQA
IPVPYYHSNV DSDEIMFYCG GDYEARKGSG IGQGSVSIHP GGHAHGPQPG AYERSIGVEF
FDELAVMVDT FRPLELGEGA LACEDPNYAW TWAGRGPKQ
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