Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_06970 |
Symbol | |
ID | 8386035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 711990 |
End bp | 712565 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644974794 |
Product | predicted GTPase |
Protein accession | YP_003132595 |
Protein GI | 257054763 |
COG category | [R] General function prediction only |
COG ID | [COG2229] Predicted GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0253092 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCTGC GCAGCACGGC GGCGGACGGC GTGAAGATCG TGATCGTGGG TGGCTTCGGC GTCGGTAAGA CGACGCTGGT GCGCGCGGTG AGCGAGATCA GGCCGCTCAG CACCGAGGAG ACGATGACCG AGGCGGGGCG TGGCATCGAC ATCACGACCG GACTCGTCGA CAAGACCAGT ACCACGGTGG CGTTCGACTT CGGCCGGGTG TCACTCACCG ACGAATTGGT GCTGTACCTG TTCGGGGCGC CGGGACAGCA GCGGTTCTGG TTCCTGTGGG ATCGGCTGTT CGCGGGGACG CTGGGCGCGG TCGTGTTGGT GGACACCCGA CGGATCGAGG ACTCGTGGTA CGCCATCGAT CGGCTGGAGC AGTACGGGAT GCCGTTCATC GTGGCCCGCA ACAACTTCCC CGGAACCGCT CACGGACTCG GGGAGCTCCG GGAAGCGCTG TCGGTGCACG ACACCGTCCC CGTCGTGGAG TGTGACGCGC GGCAGCGGAG CTCGGCGAAG TACGTGTTGA TCACGCTGGT CCACCACCTC TACACGATGT CCCGGGCTCG GGGTGGATAC GGCTGA
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Protein sequence | MPLRSTAADG VKIVIVGGFG VGKTTLVRAV SEIRPLSTEE TMTEAGRGID ITTGLVDKTS TTVAFDFGRV SLTDELVLYL FGAPGQQRFW FLWDRLFAGT LGAVVLVDTR RIEDSWYAID RLEQYGMPFI VARNNFPGTA HGLGELREAL SVHDTVPVVE CDARQRSSAK YVLITLVHHL YTMSRARGGY G
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