Gene Svir_06970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06970 
Symbol 
ID8386035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp711990 
End bp712565 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID644974794 
Productpredicted GTPase 
Protein accessionYP_003132595 
Protein GI257054763 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0253092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCTGC GCAGCACGGC GGCGGACGGC GTGAAGATCG TGATCGTGGG TGGCTTCGGC 
GTCGGTAAGA CGACGCTGGT GCGCGCGGTG AGCGAGATCA GGCCGCTCAG CACCGAGGAG
ACGATGACCG AGGCGGGGCG TGGCATCGAC ATCACGACCG GACTCGTCGA CAAGACCAGT
ACCACGGTGG CGTTCGACTT CGGCCGGGTG TCACTCACCG ACGAATTGGT GCTGTACCTG
TTCGGGGCGC CGGGACAGCA GCGGTTCTGG TTCCTGTGGG ATCGGCTGTT CGCGGGGACG
CTGGGCGCGG TCGTGTTGGT GGACACCCGA CGGATCGAGG ACTCGTGGTA CGCCATCGAT
CGGCTGGAGC AGTACGGGAT GCCGTTCATC GTGGCCCGCA ACAACTTCCC CGGAACCGCT
CACGGACTCG GGGAGCTCCG GGAAGCGCTG TCGGTGCACG ACACCGTCCC CGTCGTGGAG
TGTGACGCGC GGCAGCGGAG CTCGGCGAAG TACGTGTTGA TCACGCTGGT CCACCACCTC
TACACGATGT CCCGGGCTCG GGGTGGATAC GGCTGA
 
Protein sequence
MPLRSTAADG VKIVIVGGFG VGKTTLVRAV SEIRPLSTEE TMTEAGRGID ITTGLVDKTS 
TTVAFDFGRV SLTDELVLYL FGAPGQQRFW FLWDRLFAGT LGAVVLVDTR RIEDSWYAID
RLEQYGMPFI VARNNFPGTA HGLGELREAL SVHDTVPVVE CDARQRSSAK YVLITLVHHL
YTMSRARGGY G