Gene Svir_06950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06950 
Symbol 
ID8386033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp711147 
End bp711563 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content68% 
IMG OID644974792 
Producthypothetical protein 
Protein accessionYP_003132593 
Protein GI257054761 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.336684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0389963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CCGATCAAAG TCTCGAATGG CTTCTGCAAA GCCTGTTGGA GCAGACCCCC 
GGGGCACGCC ACGCCCTCGT GCTCTCCCGG GACGGCCTCA AGTTGTGCCA CACCCGTGGC
CTCGACGTCG ACCAGGCCGA CCAGCTGTCG GCGATCGCCG CGGGCGTGCA GGCGCTCGCG
CAGAGCGCCT CCGCGGAGTT CGGCGACGGC TCCGGTGGGG TACGGCAGTC GATGACCGAG
TTCCACGGTG GGGTGCTGTT CGTCGTGGGA GCCGGTGAAG GCGCCCACCT TGCGGTGGTG
GCCACCGAGA GCGCCGACGT CGGACTCGTC GGGCACAAGA TGAACGAGCT GGTGGAGCAG
ATCGGCCCGT TCCTCACCGC GCCACCCCGT TACCGTCGTC ACGGCCAGCT GACATGA
 
Protein sequence
MSTTDQSLEW LLQSLLEQTP GARHALVLSR DGLKLCHTRG LDVDQADQLS AIAAGVQALA 
QSASAEFGDG SGGVRQSMTE FHGGVLFVVG AGEGAHLAVV ATESADVGLV GHKMNELVEQ
IGPFLTAPPR YRRHGQLT