Gene Svir_06820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06820 
Symbol 
ID8386020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp697615 
End bp698727 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content68% 
IMG OID644974779 
ProductK+ transport system, NAD-binding component 
Protein accessionYP_003132580 
Protein GI257054748 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.074637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0591627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGGT CGTGGAATCT CGGCACCGAT GACGAGCAGT TGTCCGACCG GCCGGGATAC 
GAACTCGTCG GCGTGGTCGG CATGCCTCCG CGCGCCGTCG GCCCCGGCCG GGCCATCGGC
CGCAGGGTGT TGTTCGCGTT GGCGGTGTTG CTGGTCGTGG TGTTCGCCGT CTACGTCGAC
CGCGGAGGGT ACCGGGACGC CAACGGCGAC GGGATCTCGC TGCTCGACTG CTTCTACTAC
GCCACCGTGT CGCTGTCCAC GACCGGTTAC GGCGACATCA CCCCGGCCAG CGATTCTGCT
CGACTTACGA ACATCGTCCT GATCACCCCG CTGCGGGTGG TGTTCCTGAT CGTGTTGATC
GGAACGACTC TGGAGGTGTT GACCGAGCGT TCCCGGCAGG CGTTCCGGAT CCGGAGATGG
AGGCGCACAG TGCGCGATCA CCTGGTCGTC GTCGGCTTCG GGACGAAGGG GCGCTCGGCG
GTGGAGGCTT TCCTTGCCGA GAAGGACGGC AAGCCCGAGC AGATCGTGGT GGTGGACACC
GACAGGGCGG CGCTCAGTGT CGCCAACGCG CGGGGATTGG TCACGGTGCA CGGTTCCGCC
ACGCGTGCCG ACGTGCTGCG GGTGGCGGGG GTGCCGCGGG CACGCGCGGT GGTGGTCGCA
CCGAACCGGG ACGACACCGC AGTGCTGGTG ACCCTCACGG CGAGGACGCT GGCGCCGCGG
GCCCGCATCC TCGTGGCCTT GCACGAGATG GAGAACGTCA GGCTGCTCAA GCAGTCCGGG
GCCGATCAGG TGGTGGTGTC GAGCGAGACC GCGGGCAGGT TGCTGGGGAT CGCGACGGTG
GCCCCACACG TGGTGGACAC GGTCGAGGAT CTGTTGACCC CCGAGACGGG GCTGGCGCTC
GACGAGCGTC CCGTGACCCC GGCCGAGGAG GGCCGGTCAC CGCGGGAGTT GTCCGACATC
GTGCTCGCTC TCGTCCGGGA CGGCAGGATG CGCCGCATGG GGGAGGACGG AACGGAGGTA
CTGCGGCCCG GGGACCGATT GCTGTACGTG CGGAATCTTC AAGGGGAGGA CGGGCAAGGG
GAGATGGGGA GTCTCTTCCC CCGAACGCAG TGA
 
Protein sequence
MVRSWNLGTD DEQLSDRPGY ELVGVVGMPP RAVGPGRAIG RRVLFALAVL LVVVFAVYVD 
RGGYRDANGD GISLLDCFYY ATVSLSTTGY GDITPASDSA RLTNIVLITP LRVVFLIVLI
GTTLEVLTER SRQAFRIRRW RRTVRDHLVV VGFGTKGRSA VEAFLAEKDG KPEQIVVVDT
DRAALSVANA RGLVTVHGSA TRADVLRVAG VPRARAVVVA PNRDDTAVLV TLTARTLAPR
ARILVALHEM ENVRLLKQSG ADQVVVSSET AGRLLGIATV APHVVDTVED LLTPETGLAL
DERPVTPAEE GRSPRELSDI VLALVRDGRM RRMGEDGTEV LRPGDRLLYV RNLQGEDGQG
EMGSLFPRTQ