| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06810 |
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| Symbol | |
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| ID | 8386019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 694311 |
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| End bp | 697583 |
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| Gene Length | 3273 bp |
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| Protein Length | 1090 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644974778 |
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| Product | DNA/RNA helicase, superfamily I |
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| Protein accession | YP_003132579 |
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| Protein GI | 257054747 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.289217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.25894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGA CCCGGCAGGC GGCGACGAGA CTGGTCTCCC CGGCGGACAT CGCCGAGGCG
TTGGGTCTGC CCGTTCCCAC CCCGGAACAG GCCGCCGTGG TGGCCGCTCC GCCGGAACCC
GCGCTGGTGG TCGCGGGTGC GGGTGCGGGG AAGACCGAGA CGATGGCCGC GCGCGTGGTG
TGGTTGGTGG CCAACGGGCT GGTCACACCC GATCGGGTGC TCGGGTTGAC CTTCACGCGC
AAGGCCGCGC GTCAGCTCGC CGATCGGGTC CGTGCCCGGC TGCGCAGACT GGCGGGTTCC
GGGCTGTTGG ACGACGTCGA CCCGAGCGGA CGGCGCAGGC TCGCGGTCGC CTCGGGCGAG
CCGACCGTGC TCACCTACCA CGCCTACGCG GGCCGGTTGC TGGCCGAGTA CGGGTTGCGG
CTACCGGTAC AGCCGGGGGC GCGCATCCTG TCCGAGACCG CGTCGTGGCA GCTGGCGTAC
CGGGTGGTGT CGTCGTGGGA CGCCGACCTC GACACCGACA AGGCGCCCAT GACGGTGACC
GAGCACCTCT TGGCGTTGGC GGGCGAACTG GGTGAGCACC TGGTGTCGCC GGAGCGGTTG
CGTGAGTACA CGACGTGGTT CTGCGATCTC GTGGAGAACG CGCCGCGGGC GAAGGGGCAG
CGGGCCAAAC CGAAGAAGGA ACTGCTCGAC ATCGTGGCCG CGCAACGTCT GCGACTGCAG
TTGTTGCCGT TGGTGGAGGC CTACGAGCAC CGGAAACGGG CCGAGGGGGC GTTGGACTTC
GCCGACCAGA TGTCCCTGGC GGCGCGGCTC GCCGAGACCC AGCCCGACGT GGTGGCCTCC
GAACGCGAGC GATACGGGGC GGTGTTGCTG GACGAGTACC AGGACACCGG GCACGCCCAG
CGGGTGCTGC TGCGGTCGTT GTTCGGCGGT CCCGCGCCCA TGCCGGTCAC CGCGGTGGGC
GACCCGGCGC AGGCGATCTA CGGATGGCGG GGTGCGAGCG CCGCCAACCT ACCGAGGTTC
ACCACCGACT TCCCCCGTCT CGACGAGAGG ACCGGGCAGC CGGTGCCGGC GCGCGAGTAC
GGGATGTTGA CGAGCTTCCG GAACCCGCCG GAGGTGCTCA CCCTCGCCAA CTCCATCGCC
GAACCGTTGC GGGCGAAAGG GCTGGGCGTG CAGGAGTTAC GAGCACGTGC CGACGCCGGC
CCCGCCGACA TCCGCGTGGC GCTGTTGCCC GATGTGGTGA GCGAACGCGA GTGGGTGGCC
GACCAGATCG CCACCCGGTG GTTCGCCGAG CGGGACGCCA CCGGGACCGC GCCGACCGCC
GCCGTGCTCG TGCGCAGGCG GGTCGACATG GCCCCCATGG CCGCCGCGTT GCGGGCACGG
GGACTGCCGG TGGAGGTCGT GGGCCTCGGC GGGTTGCTGG ACGAACCGGA GGTCGCCGAC
CTGGTGGCCA CGTTGCGGGT ACTGGCCGAG CCGCTGTCGG GCACGGCGGC GGTACGGCTG
TTGACGGGCG CGCGGTGGCG TCTCGGTGCC GCCGACCTGG GGGCGTTGTG GCGCAGGGCG
GGGGAGCTGT CCGCCGCGGA CGACACCGTG GTGGCCGAGC GCGCCGAACA GGCCGGGCTC
GTGGACGCGA TCGACGATCC GGGTGAGCCG TCCCGCTACT CCGAGGAGGG TTACGCCCGG
ATCCGCCGGT TGAGTCGGGA ACTGGAGGCG TTGCGTCGGC GGATGGACCA GCCGCTGCCC
GAGTTGGTCG CCGATGTCGA ACGCACGATG CTGCTGGATG TGGAGGCGCT GGCCAGGCCG
GGGGCGGTGG GGCGAGCGCA TCTCGACGCG TTCGCCGACG TGGTCAACGA CTACGCCGAG
AACTCACCGA CGGCCACGTT GCTGTCGTTC GTCGACTACC TCGCCGCGGC CACCAGGGCT
GAGGACGGGC TCGAACCCGG GGAGGTGGAG GTCGTCCCCG ACCGGGTGCA GGTGCTCACC
GCGCATTCCG CCAAGGGGTT GGAGTGGCGC ATCGTGGCCG TGCCGCACCT GGTGGACAGG
ACGTTCCCCA ACGAGCGCAA GACGTCGTCG TGGTTGAAGA CGGTCACCGA GCTGCCCGCC
GCGTTGCGGG GCGATGCGCA GGACCTGCCG CAGCTCGCCC TGCGCGGCGG TGAGGATCGC
AAACAGGTCG AGGAGGCGCT GGCCGAACAC GAGGAGGGCT TCAGACGGCG GCACGCGGAG
GAGGAACGCA GGCTGTGCTA CGTGGCGCTG ACCCGGTCAG AACACTGCCT CGTGGTCTCC
GGGTACCGCT GGGGTGATGC CAACGCCACG GAACCCAAGG CGCCGTCGCC GTTCCTCACC
GAGGTGGCCG AGCGGGTGCG CGAGGATCCC ACCGTCGGCG TCGTGGAGCA TTGGTGCTCC
GAGCCCGGGG AGAACCCGTT GGCCGGTGTC TCGCGGGAGA CGGAGTGGCC GGTCGACCCG
CTCGGGGCCC GTCGTCCGGC GGTGGACGAG GGGGCCCGAC TGGTCCTGGA GGCACTGGAG
GAACTGGAGT CCGGAGCCGA CGCCGAGACC GACGAGGAGA TCACCGAGGA GGACGACCCC
GACAACTGGG TGAGCGACAC CGACGTCCTC CTGGCCGAAC GCGCGCGTGC CAGGGAACCG
CAGGTCGAGA TCGAGCTGCC CGGCAAGTTG TCCGTGAGTC AGCTCGTGGA CCTGGCGGGG
GAGCCGGAGG ACCTCGCGCG CAGGTTGCGT AGGCCGTTGC CGTTCCCGCC CAACGCCTAC
GCACGGCGTG GGACCGAGTT CCACGGCTGG TTGGAACGCC GGTTCGCCAG TGACAAGCTG
TTCGACCTCG ACGAGCTGCC CGGGGCGGCC GACGCCGACG TCGGGGACGC CGACCCCGCC
GATCTGGAGG CGCTCAAGGA GGCGTTCGAA CGCAGCCCGT GGGCACAGCG CGTCCCGCAC
GACGTCGAGG TGCCGTTCTC CACCGCCATC GACGGCATCA CCGTGCGCGG TCGCATCGAC
GCCGTGTTCG CCGACCCGGA CGGCGGTTGG ACCGTGGTCG ACTGGAAGAC GGGCGCGTTG
CCCGACGCCG AGCGGATGCC CGCGTTGGCG GTGCAGCTCG CCGCGTATCG GTTGGCGTGG
GCGAACCTGT CGGGAGCGCC GTTGGAGAAG GTGCGTGCGG CGTTCCACTA CGTACGGGCG
AATCGGACCG TGCGTCCGGT GGACCTCGCT GACGCGGACG GGCTACGCGC GCTGCTTCGA
ACCGTCCCGA TGCGGGAAAA CGACCGGATG TGA
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| Protein sequence | MTETRQAATR LVSPADIAEA LGLPVPTPEQ AAVVAAPPEP ALVVAGAGAG KTETMAARVV
WLVANGLVTP DRVLGLTFTR KAARQLADRV RARLRRLAGS GLLDDVDPSG RRRLAVASGE
PTVLTYHAYA GRLLAEYGLR LPVQPGARIL SETASWQLAY RVVSSWDADL DTDKAPMTVT
EHLLALAGEL GEHLVSPERL REYTTWFCDL VENAPRAKGQ RAKPKKELLD IVAAQRLRLQ
LLPLVEAYEH RKRAEGALDF ADQMSLAARL AETQPDVVAS ERERYGAVLL DEYQDTGHAQ
RVLLRSLFGG PAPMPVTAVG DPAQAIYGWR GASAANLPRF TTDFPRLDER TGQPVPAREY
GMLTSFRNPP EVLTLANSIA EPLRAKGLGV QELRARADAG PADIRVALLP DVVSEREWVA
DQIATRWFAE RDATGTAPTA AVLVRRRVDM APMAAALRAR GLPVEVVGLG GLLDEPEVAD
LVATLRVLAE PLSGTAAVRL LTGARWRLGA ADLGALWRRA GELSAADDTV VAERAEQAGL
VDAIDDPGEP SRYSEEGYAR IRRLSRELEA LRRRMDQPLP ELVADVERTM LLDVEALARP
GAVGRAHLDA FADVVNDYAE NSPTATLLSF VDYLAAATRA EDGLEPGEVE VVPDRVQVLT
AHSAKGLEWR IVAVPHLVDR TFPNERKTSS WLKTVTELPA ALRGDAQDLP QLALRGGEDR
KQVEEALAEH EEGFRRRHAE EERRLCYVAL TRSEHCLVVS GYRWGDANAT EPKAPSPFLT
EVAERVREDP TVGVVEHWCS EPGENPLAGV SRETEWPVDP LGARRPAVDE GARLVLEALE
ELESGADAET DEEITEEDDP DNWVSDTDVL LAERARAREP QVEIELPGKL SVSQLVDLAG
EPEDLARRLR RPLPFPPNAY ARRGTEFHGW LERRFASDKL FDLDELPGAA DADVGDADPA
DLEALKEAFE RSPWAQRVPH DVEVPFSTAI DGITVRGRID AVFADPDGGW TVVDWKTGAL
PDAERMPALA VQLAAYRLAW ANLSGAPLEK VRAAFHYVRA NRTVRPVDLA DADGLRALLR
TVPMRENDRM
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