Gene Svir_06780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06780 
Symbol 
ID8386016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp689521 
End bp690375 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content70% 
IMG OID644974775 
Productsiderophore-interacting protein 
Protein accessionYP_003132576 
Protein GI257054744 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.942698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG AGGCGACTCG GCCACGCCTG GCCTACATGA ACGCGCAGGT GCGCGACGTG 
CGCAGGGTTA CTCCCCGAAT GGTGCGTGTC ACGTTCGCAG GCGCTGATCT CAACGAGTTC
GTGGACGCCG CCCCCGACCA ATACGTCAAG GTGTTCTTCC CCGTCCCGGG AACTCGTCGG
CCGAAGCTTC CTCCCCCGCC GACGGCCGAC GGCATGTCGT GGTACCGCCA GTACCTGAAC
ATGCCCGACG ACGTGCGACC CCCGATGCGG ACGTACACGG TCCGTGCCAG CAGGCCCCAC
GTGGGCGAAC TCGACATCGA CTTCCTGCTG CACGACGACG CCGGCCCCGG CTCCCGTTGG
GCGGAGTCGG CCAAACCCGG TGACGAGGTC GCGTTGCTCG GCCCCCACGG GCTGTACGAG
GTGCCCGCCG GAACGTCGTG GCAACTGCTC GTCGGCGACG AGTCGGCCGT GCCCGCCATC
GCGGCCATCT GCGAGCAGCT ACCCGAATCC GCCACCGTGA CCGTATTCGT GGAAATCGCC
GACCCCACCG ACGAGATCCC GCTGGAGCGG CCCGGCGGCG AACCCGTCGA CGTGCGGTGG
GTGCTCCGCG GCGACGCACC CGTGGGCGAA GCCGTGTTGG CCGCCGTGCG GGAGGCGAGG
TTGCCCGAGG GCGAACCGTA CGCGTGGATC TCCGGCGAGG CCGATCTGGT CAAGCATGTC
CGCCGCCACC TCGTGCGCGA ACGCGGTGTC GACAAGCGCC GCATCACGTT CACCGGCTAC
TGGCGACGCG GACGCAGTGA GGAGGCCGCG GGGCGCGAAC AACTGCGTGA GTACGACCGC
GCCACCGCGC GATGA
 
Protein sequence
MTIEATRPRL AYMNAQVRDV RRVTPRMVRV TFAGADLNEF VDAAPDQYVK VFFPVPGTRR 
PKLPPPPTAD GMSWYRQYLN MPDDVRPPMR TYTVRASRPH VGELDIDFLL HDDAGPGSRW
AESAKPGDEV ALLGPHGLYE VPAGTSWQLL VGDESAVPAI AAICEQLPES ATVTVFVEIA
DPTDEIPLER PGGEPVDVRW VLRGDAPVGE AVLAAVREAR LPEGEPYAWI SGEADLVKHV
RRHLVRERGV DKRRITFTGY WRRGRSEEAA GREQLREYDR ATAR