Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_06780 |
Symbol | |
ID | 8386016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 689521 |
End bp | 690375 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644974775 |
Product | siderophore-interacting protein |
Protein accession | YP_003132576 |
Protein GI | 257054744 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2375] Siderophore-interacting protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.942698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG AGGCGACTCG GCCACGCCTG GCCTACATGA ACGCGCAGGT GCGCGACGTG CGCAGGGTTA CTCCCCGAAT GGTGCGTGTC ACGTTCGCAG GCGCTGATCT CAACGAGTTC GTGGACGCCG CCCCCGACCA ATACGTCAAG GTGTTCTTCC CCGTCCCGGG AACTCGTCGG CCGAAGCTTC CTCCCCCGCC GACGGCCGAC GGCATGTCGT GGTACCGCCA GTACCTGAAC ATGCCCGACG ACGTGCGACC CCCGATGCGG ACGTACACGG TCCGTGCCAG CAGGCCCCAC GTGGGCGAAC TCGACATCGA CTTCCTGCTG CACGACGACG CCGGCCCCGG CTCCCGTTGG GCGGAGTCGG CCAAACCCGG TGACGAGGTC GCGTTGCTCG GCCCCCACGG GCTGTACGAG GTGCCCGCCG GAACGTCGTG GCAACTGCTC GTCGGCGACG AGTCGGCCGT GCCCGCCATC GCGGCCATCT GCGAGCAGCT ACCCGAATCC GCCACCGTGA CCGTATTCGT GGAAATCGCC GACCCCACCG ACGAGATCCC GCTGGAGCGG CCCGGCGGCG AACCCGTCGA CGTGCGGTGG GTGCTCCGCG GCGACGCACC CGTGGGCGAA GCCGTGTTGG CCGCCGTGCG GGAGGCGAGG TTGCCCGAGG GCGAACCGTA CGCGTGGATC TCCGGCGAGG CCGATCTGGT CAAGCATGTC CGCCGCCACC TCGTGCGCGA ACGCGGTGTC GACAAGCGCC GCATCACGTT CACCGGCTAC TGGCGACGCG GACGCAGTGA GGAGGCCGCG GGGCGCGAAC AACTGCGTGA GTACGACCGC GCCACCGCGC GATGA
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Protein sequence | MTIEATRPRL AYMNAQVRDV RRVTPRMVRV TFAGADLNEF VDAAPDQYVK VFFPVPGTRR PKLPPPPTAD GMSWYRQYLN MPDDVRPPMR TYTVRASRPH VGELDIDFLL HDDAGPGSRW AESAKPGDEV ALLGPHGLYE VPAGTSWQLL VGDESAVPAI AAICEQLPES ATVTVFVEIA DPTDEIPLER PGGEPVDVRW VLRGDAPVGE AVLAAVREAR LPEGEPYAWI SGEADLVKHV RRHLVRERGV DKRRITFTGY WRRGRSEEAA GREQLREYDR ATAR
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