Gene Svir_06730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06730 
Symbol 
ID8386011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp683365 
End bp684396 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID644974770 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003132571 
Protein GI257054739 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAGA CGTTGAACAG TTCACCCGAC AGCTCGACAT CCGTCAGTCC GGCCTCACGG 
CCACCACTCA CGCACGTACC GCTGTCGAGC ACGCCCCTGC CCGAACTCGA CCTCGCCGCG
GGCCCTTGGC CGGGGACCCG GCGACAGGTC GGGGAACTCA CCCTCCATGT CCGACACATA
GCCGGCGCCG ACACAACACG GACCCGATCC GTGCCCGCGG TCTACGTGCA CGGACTCGGC
GGTTCCTCAA CGAACTGGAC GGATCTGGGC AGACTGCTCG CCCCACATGC TCCTGGACAC
GCAGTGGACC TGCCCGGGTT CGGGCTGTCC GAGCCACGAG ACGGGTTCTC GTTCAGCCTT
TCCGCGCACG CCGAGGTGCT GGCCGGCTAC CTAGCCGAGC ATACCGAGGC GCCCGTACAC
CTGATCGGTA ACTCGATGGG TGGCGCGATC TCGATGCTCG TCGCCGCACG CAGGCCCGAA
CTCGTGCGCA CGCTGACACT CATCTCGCCC GCGGTGCCCG ACCGGCGACC GGACCCGCGC
AGGCTGGCCG ATCCTCGACT CGCGTTGGCG TATCTGCCGT TGATCGGCAA ACGGGTCCGG
CGGACCCTGG CGGCGATGAC CCCCCGACAG CGCGCCGAAC AAGTCCTGCG ACTGTGTTTC
GCCGATCCGA CCTCGGTACC CGACCACCGT TTCGAGGAGT TCGTCGAGGA ACACGGTGCG
CGTGCCGCCC ACGACTGGGC CGAACGCGCC ATGGCGCTCA GCGCTTTGGA GATCTTCCGC
ACATGGTTCG CCCGGGGTAC CGAGTCGCTG TGGTCGGTGG CACCGCGAAT CGGCGCGCCG
ACCCTCGTCG TCTGGGGCAC CCACGACCGC GTCATCTCCG TGCGCCGAGC GCCTCGTACC
GCGCGGCTCA TTCCCCGCGC GCGACTGTTC GTGCTCCCCA GAACGGGGCA CGTGGCGCAG
ATGGAGCGAC CCACGACCGT GGCCAAGGCC GTGCTCGGTA TGTGGGAGAG CGTCGAGGCG
GGACGCTGGT GA
 
Protein sequence
MSETLNSSPD SSTSVSPASR PPLTHVPLSS TPLPELDLAA GPWPGTRRQV GELTLHVRHI 
AGADTTRTRS VPAVYVHGLG GSSTNWTDLG RLLAPHAPGH AVDLPGFGLS EPRDGFSFSL
SAHAEVLAGY LAEHTEAPVH LIGNSMGGAI SMLVAARRPE LVRTLTLISP AVPDRRPDPR
RLADPRLALA YLPLIGKRVR RTLAAMTPRQ RAEQVLRLCF ADPTSVPDHR FEEFVEEHGA
RAAHDWAERA MALSALEIFR TWFARGTESL WSVAPRIGAP TLVVWGTHDR VISVRRAPRT
ARLIPRARLF VLPRTGHVAQ MERPTTVAKA VLGMWESVEA GRW