| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06710 |
|---|
| Symbol | |
|---|
| ID | 8386009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 681653 |
|---|
| End bp | 682543 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644974768 |
|---|
| Product | predicted hydrolase or acyltransferase of alpha/beta superfamily |
|---|
| Protein accession | YP_003132569 |
|---|
| Protein GI | 257054737 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC GCCAGTTCGT CACCCGTGAC GGCACCCGGC TGGCCGTCGA AACCGCCGAA
CCCGTCGGTT CGGCGGCGGA GACGACGGTC GTCCTCGTCC ACGGGTGGAC CCAGGATCGC
CGGACCTGGG ACCGCGTCGT CGGTCTGCTT CCGCCGGACG TTCGCCGGGT GCGGTACGAC
CTGCGTGGAC ACGGCGAATC GGCACCCGCC GAACCCGGAA CGGCCACCAT CGATCACCTC
GCCGACGACC TCGCCGAGGT GATCGACGCG GAGGCGCCCT CGGGCCGACT CGTCCTCGCG
GGTCACTCGA TGGGCGGCAT GACGATCATG GCGTTGGCCG ATCGACACCC GGAGTTGGTG
CGAAACCGTG TCAACGGGGT GGCGTTCGTC TCCACGGCGT GTTCCGGCAT GGACCGGATG
ACCCTCGGTC TCCCCGGTTT CCTCGGAAAC CTCGCGCACC GTGTCGAACG CGGGCTCGCC
GACCTGCTCA CGCGGTACCG GGGAGACCGG TTGCCGATCG GGCGTATTCC GGCGAACCTG
GCGATCCGGT GGCTCGTGTT CGGCCGCGGC CCCGGGAATG CCGATGTGGC CTCGGTGGTG
GACCAGTTCC TCCGGGCGCA CCCCGCGAGC GTCGGTGCGT TCCAGAACGC GATCTCACTG
CACGACCGCA CGGCCGCGTT GGCGACCCTG CGCCACACAC CCAGCGTGGT GCTGGCGGGT
ACGGCCGACC GGCTCTGCTC CCCTCGGCAC GCACAGGCCA TCGCCGCCGA ACTGGAGGCC
GGTCACTTGG TGCTGTATCC GGACGCGGGG CACATGTTGC CGCAGGAACG CGCACACGAC
GTCGCCGAGC ACATCGCGGC CCTGTGCCGC TTCCCGCTCG TGACGAAGTG A
|
|---|
| Protein sequence | MSTRQFVTRD GTRLAVETAE PVGSAAETTV VLVHGWTQDR RTWDRVVGLL PPDVRRVRYD
LRGHGESAPA EPGTATIDHL ADDLAEVIDA EAPSGRLVLA GHSMGGMTIM ALADRHPELV
RNRVNGVAFV STACSGMDRM TLGLPGFLGN LAHRVERGLA DLLTRYRGDR LPIGRIPANL
AIRWLVFGRG PGNADVASVV DQFLRAHPAS VGAFQNAISL HDRTAALATL RHTPSVVLAG
TADRLCSPRH AQAIAAELEA GHLVLYPDAG HMLPQERAHD VAEHIAALCR FPLVTK
|
|---|
| |