Gene Svir_06640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06640 
Symbol 
ID8386002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp675144 
End bp676499 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content71% 
IMG OID644974761 
Producthypothetical protein 
Protein accessionYP_003132562 
Protein GI257054730 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC CGCCCGATCG GTCCAGCGAG CACAGCCCCG CGACGCCCGC GCACCCGCCG 
GGAACCGAGG ATGTGCTCGC GTCCGCGGAC GTCCGTCCCA CCGACCCCAC CGACTCCGCG
CTCTCCCGGC GGCCATCGCG GTCATCGCGC CGTTCCCCCT GGGACCGTCC TCGGGACCGG
GTCCTCGCGG CGGTTCTGGC GGTCGTCTGC GCCGCCGCGG TCACGGTGGT GTGGCTGTTC
AGTGACAGCC GTGCGACGGA ACACCGCACG GCCTCGGTAC CGCCACCCCG GCTGGATCCC
CCGGCGGCCG TGCCGGGCAG CCTCGCGGAA CGGTGGCGCG CCCCCAGCGA GGCCACGCCC
GAACCGGTCG CCGAGGGCGG GTTCGTGATC ACCGCTTCCG CGGGCACGGT CGCGGGCCGC
GACCCGTTGA CCGGCGAGAT CCGTTGGAGC TACTCACGAG ACCTCGAACT GTGCACGGTC
GCGGGCGCAT GGTCGAAGGC CGTGGCCGTC TACCGCAAGG ACCTCGGGTG CAGTGAGGTC
ACCCAGCTCG ACCCCGGCAC GGGGCGTCGC ACGGCCCAGC GCAACGGTGA CGCCGAAGCG
CCCACCCGGC TCGTCGTGGA CGACGCGCAC GTGACCACCA CCGGCGAACG ACTGCTCAAC
ACCTGGCGTA GCGATCTGGT TCAAACCATG GAGTACGGCC GGGTCCCCGC GCCCGAGAAC
CCGCAGCGTC AGCCCCGCTC GGGATGCCGG TACTCGAACG TGTCGGCCGG GGCCGACAAA
GTGGGGGTCA TCGAGCACTG TCCGAAGGAA GTGGGCGCGC GCCTGACCGT GCTGAAAGCC
GCGGGTGAGG AGTCCGACGA ACCCGAGCAG GTGTTCAGCA CCCTCCTGGC GGAGCCGACC
GCCCAGCTCG TGGCCATGTC GGAGGAACGC GTGGCCGTGG CGTTGCCCGA ACAGCGCCGG
CTGCTGTTGT TCGACTACGA GGGCGAACAA CGGAGCTCCC ACGACATCGC CGTGCCGACG
GCCGAGCTCG CCACCGTCCC GGACTCGGGC GTGGTGCCCG TCTCGTCCGG CCGCGAGAAC
GTGTACTGGT TCACCGGCTC CCACACCGTG GCCCTGTCGG CGGGGGAGCT GCGACCACGT
TGGATCGCTG AAAACACCCT CGGGCCGGGT ACGGTATTCG CTGGGGAGTA CGTCGTACCC
ATCCCCGGCG GCCTGGCGGT GCTCGACGAG CGCACCGGTG CCACGACCCG TACCGTGGCC
GTGGACCGCC GAGGCCACGA CGGGTCGATC GAGCTGGAGG CGATAGGCCC GGTCCTGATC
GAGCAACGTG GACGGACTTT GGTGGCACTG AGATGA
 
Protein sequence
MSTPPDRSSE HSPATPAHPP GTEDVLASAD VRPTDPTDSA LSRRPSRSSR RSPWDRPRDR 
VLAAVLAVVC AAAVTVVWLF SDSRATEHRT ASVPPPRLDP PAAVPGSLAE RWRAPSEATP
EPVAEGGFVI TASAGTVAGR DPLTGEIRWS YSRDLELCTV AGAWSKAVAV YRKDLGCSEV
TQLDPGTGRR TAQRNGDAEA PTRLVVDDAH VTTTGERLLN TWRSDLVQTM EYGRVPAPEN
PQRQPRSGCR YSNVSAGADK VGVIEHCPKE VGARLTVLKA AGEESDEPEQ VFSTLLAEPT
AQLVAMSEER VAVALPEQRR LLLFDYEGEQ RSSHDIAVPT AELATVPDSG VVPVSSGREN
VYWFTGSHTV ALSAGELRPR WIAENTLGPG TVFAGEYVVP IPGGLAVLDE RTGATTRTVA
VDRRGHDGSI ELEAIGPVLI EQRGRTLVAL R