Gene Svir_06610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06610 
Symbol 
ID8385999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp673020 
End bp673880 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content70% 
IMG OID644974758 
ProductRecB family exonuclease 
Protein accessionYP_003132559 
Protein GI257054727 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGCAGC TCGGATTCGA TTTCGGCATC GAACCTCGGC CGCTGATCAA GGTGACGCCG 
GCCCGGCTGT CGCTCTACGA CGATTGCCCG CGCCGTTTCC GCATGACGTA TCTCGATCAG
CCCGCGCCCT CGCGTACGGG ACCGTGGGCG CACACCACGT TGGGCGCGGT GATCCACAAC
GCCCTGCGGG AGTTGTTCGC GCTCCCGGCG TCGGAACGCA CTCCCGAACG AGCCGAGGCG
CTGGTGAGCC GCCATTGGCG CAGCGGGGGG TTCGCCGACG CCGAACAGGT GGCCCGATAC
GCGGAGGCCG CCCGCCGATG GACCGCCGAC TACGTGGAAC GGCACGGCGC CGACGCCGAG
CCGGTGGGGG TGGAACGTTG GGTGTCGGCG ACGGTCGGCA GTGATCCGGC GTCGCCCTCG
TTGATCGTCG AGGGCCGGGC CGACCGCATC GACGCCCACG ACGGCGAGTT GGTCGTGATC
GACTACAAGA CGGGTCGGAC CCCACCGAGC GATGAGCACG CACGGCGGTC GCGTGCTCTT
GCGCTGTACG CCATCGCGGC CTCACGCACG TTGCGCAAAC CGTGCTCGCG GGTGGAACTG
CACCATGTGC CCACAGCCAC CGTCGCCGTC GCCGAACACA CCGACGCCGA TCTGAACGAA
CACGTGCAAA AGGCGGAGGA GACCGCCGCC GCGTCGCGTG CGGCGGCCGA TAAGCTCACC
CGAGGGGGCG ATCCAGACCA ACTCTTCCCT GCGCGACCGG CGCCTCGTTG TGCCTGGTGC
GAGTTGCGTT CTCACTGTCC CGAAGGACGG CAGGCGGTGC CGGCGGCACG CCCGTGGGAC
TTGCTGGCAC CAACGACGTG A
 
Protein sequence
MGQLGFDFGI EPRPLIKVTP ARLSLYDDCP RRFRMTYLDQ PAPSRTGPWA HTTLGAVIHN 
ALRELFALPA SERTPERAEA LVSRHWRSGG FADAEQVARY AEAARRWTAD YVERHGADAE
PVGVERWVSA TVGSDPASPS LIVEGRADRI DAHDGELVVI DYKTGRTPPS DEHARRSRAL
ALYAIAASRT LRKPCSRVEL HHVPTATVAV AEHTDADLNE HVQKAEETAA ASRAAADKLT
RGGDPDQLFP ARPAPRCAWC ELRSHCPEGR QAVPAARPWD LLAPTT