| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06580 |
|---|
| Symbol | |
|---|
| ID | 8385996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 670923 |
|---|
| End bp | 671483 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644974755 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003132556 |
|---|
| Protein GI | 257054724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.293947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGCGC CTCGCGATCC AGACGAGTAC CTGCTCGACA CTGAGCGCCG GGTGATCAGA
GTCCGGCGGC ATTGGTCCTG CCTCATCTGG CAGACCTTCG AGGCCGTCGC CCTGATCGCC
GTGTGCGTGA TGATCTCGTA CATCCTGCCG CCGGCCATGT GGCTGATGCA GAACGTCCTC
TGGTACGCCG CGCTGTTCCT CGTCCTGCGC TTCGCCTACC AGGTGATCGA ATGGTGGGTC
GAACGTCTGG TCGTCACGGA CAAACGGTTC GTGATGACCA AGGGGGTCTG GACCACGCAG
GTACTGATGA TGCCGCTCAC GAAGGTCACC GACCTGACCT ACGAACGTCC GTTCCTCGGT
CGCATCCTCG GTTACGGGAC CATGATCGTG GAGTCGGCGG GGCAGATCCA GGCGCTGAAC
CGCATCGAGT ACCTCCCGAG ACCGGAGGAG TTCTACGACA CGATCTCCGA ACTCGTCTTC
GGTGACAAAC AGAAGCAAGC CGAGCGGTTC TCGATGATCA AGGCCCAGCG GGCGGCACGT
CGAGGCAAGG TGGTCGGCTG A
|
|---|
| Protein sequence | MFAPRDPDEY LLDTERRVIR VRRHWSCLIW QTFEAVALIA VCVMISYILP PAMWLMQNVL
WYAALFLVLR FAYQVIEWWV ERLVVTDKRF VMTKGVWTTQ VLMMPLTKVT DLTYERPFLG
RILGYGTMIV ESAGQIQALN RIEYLPRPEE FYDTISELVF GDKQKQAERF SMIKAQRAAR
RGKVVG
|
|---|
| |