Gene Svir_06440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06440 
Symbol 
ID8385982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp657615 
End bp658502 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content71% 
IMG OID644974741 
Producthypothetical protein 
Protein accessionYP_003132542 
Protein GI257054710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTG GCAAGGGACG AAGGTGGCCC GAGTCGCATC TTCTTCCTGA TGCCGTGGCG 
GCGTTCGTGG ACCAGGAGCT GTCGCTGGGC GCACAGGAAC GCGCGGCGGC GCATCTCGCC
CACTGTCCCC GTTGCGCCGC CGAAGTCGCT GCCCAGCGCG CGGCCAGCGA AGCCGTGCGG
CAGGCGCGAA CACCGTCGAT CTCAGCGAGT TTTCTAGCGA GTCTGCAGCG GATCCCCCAG
ACCGCCGACC TGCCGAACGG GCCAGACAAC CTCGCCATCG GCCCGAACGG CCAGGTCATG
GCCGTGCAAC GGCCCGACCA CGTTGCGGGG CTCCGCGACG GACTCCCCTC CGGTGCGCTC
GGCACCTCGG CGCCTTTGGG TACGTCCCCC ACCGTTCTCG GCAACGGGCC GCGCCTGGCC
GGAGGTCGGA AAAGAGCGAC CCAGGGAGCC GGGGTCGTCG TCTCCGGATT GGTGCTCAGC
GCGCTCGCGC TGGTCGCCAC CACGAACCTG AGCGAGGAGG GGGCGCGGGA CGCCGACCCC
AGTGCCACGC CTCGCACCGA TGTGTTGCCC GCGAAGTTCG GGGGCCACGC TGCCACCGAC
ACCCTCAAGG CCACTCCGCT GGTGGAGGAA ACCGGAGTGG CGCCGGCCGA GTCGACCGAG
CCTTCGGAGC CTCTCCACTC TTCCGAACCC GGCCGACCTT CCGGGTCCGC TGAGACGTCC
GAGGCGTCCG AGGCCTCCGA GGCCTCGGAG ACCACGGTCA CCTCCACCGT GCCCACCAGC
ATCGGCATGA CCGTGTCGTC GACGTCGGCG ACCCCGGTTC CCCCGTCGGA TGTCGTCGCG
TCGGCCACCA CGGGTGCCGT GATAGCGCCC CCGGGTGTTC CACACTGA
 
Protein sequence
MTVGKGRRWP ESHLLPDAVA AFVDQELSLG AQERAAAHLA HCPRCAAEVA AQRAASEAVR 
QARTPSISAS FLASLQRIPQ TADLPNGPDN LAIGPNGQVM AVQRPDHVAG LRDGLPSGAL
GTSAPLGTSP TVLGNGPRLA GGRKRATQGA GVVVSGLVLS ALALVATTNL SEEGARDADP
SATPRTDVLP AKFGGHAATD TLKATPLVEE TGVAPAESTE PSEPLHSSEP GRPSGSAETS
EASEASEASE TTVTSTVPTS IGMTVSSTSA TPVPPSDVVA SATTGAVIAP PGVPH