| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06430 |
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| Symbol | |
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| ID | 8385981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 657025 |
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| End bp | 657618 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644974740 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003132541 |
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| Protein GI | 257054709 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGGTGC CTCAGCTGCC ACACGACAGC ACACAGACCG CGCCGGTGTT GGTCGAGGAT
GACGCCACAT GGACGCCGCC GACCTGGGAC GAGGTCGTGC GGCAACACGC CGATCGCGTG
TATCGGCTCG CCTACCGCTT GACGGGCAAC GCCCACGATG CGGAAGACCT CACTCAAGAG
ACGTTCATCC GGGTGTTCCG TTCACTCGCC TCCTACAAGC CGGGAACGTT CGAGGGTTGG
TTGCACCGCA TCACGACGAA TCTGTTCCTC GACATGGCGA GGCGTCGTTC CCGGGTCCGG
ATGGAGGGCC TTCCCGAGGA CACCGACCGT CTCGTCGGCG ACGGACCGAG TCCCGAACAG
GTGTACTCGG ACACGCACCT GGACCCGGAT CTGCAAGCCG CTCTCGACGA GCTGCCGCCC
GAGTTCAAGG CGGCTGTGGT GTTGTGTGAT GTCGAAGGCT TGTCCTACGA GGAGATCGGT
GCCACGCTCG GCGTTAAGCT CGGCACTGTT CGCAGCCGGA TCCACCGTGG TCGACAGGCG
TTGAAGTCTT CTCTCGAGCG CCGTCGCGCG CTCAAACAGG AGGCACGGGT ATGA
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| Protein sequence | MEVPQLPHDS TQTAPVLVED DATWTPPTWD EVVRQHADRV YRLAYRLTGN AHDAEDLTQE
TFIRVFRSLA SYKPGTFEGW LHRITTNLFL DMARRRSRVR MEGLPEDTDR LVGDGPSPEQ
VYSDTHLDPD LQAALDELPP EFKAAVVLCD VEGLSYEEIG ATLGVKLGTV RSRIHRGRQA
LKSSLERRRA LKQEARV
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