| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06410 |
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| Symbol | |
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| ID | 8385979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 654609 |
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| End bp | 655826 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644974738 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003132539 |
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| Protein GI | 257054707 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.859642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGCCC GTAGGGTCAC GGTGGCGGTG GCCGCCGCGG GTATCTGTTC GTTCTCGTTG
CTGTACGCGC CGCAGCCTTT GTTGCCGCAG CTCGCGGCTG AGTTCGGCCT CGACCCCGGT
GCCGCTTCGT TGGCCGTGTC GATGGGGACG GGCGGTCTCG CCGCGGCGGT GGTGCCCATC
GCCGTGCTCT CGGAGATCGT CGGCAAACGG CCGGTCGTCA TCGTGTCCGT CCTGGCCTCG
GCTCTGCTGG GGCTGGTGTT GCCGTTCGCG CCCTCGTACG AGGTGTTGCT GGTCCTGCGC
GTGTTGCAGG GGATCGCCAT CGCCGGATTC CCGGGCGTGG CGGCCGCCTA TCTGACCGAG
GTGTTGGGGC GCGCCGGGGT GGCCGGCGCG GTCGGGGCCA TGATCGCCGG TAACACCGTG
GGCGGCATGC TCGGGCGCCT CGTCGCCGGA GGGGTCACCG AACGGCTCGG CTGGCACGGT
GCTCTCGCCG TGGTCGGGGG TATCGGGCTG TTGTGCGCCC TGCTCACCGT CGCCACGCTG
CCGCGGGTGC CGAGGGCGTC GCGACGGGAT CGCGAGGGGG CCGGGGGAGT CGGGGAAGCC
ACCGAATCGC TCGGGTCGAA GCTGCGCGCC GTGCTGTCCG GCTTCCGGGT CGGTCTGCGC
AGACCCGTGC TGTGGGCGCA GTACGGCGTG GCGCTGTTGG CGATGGGGTC CTTCGTGGCG
TTGTACAACG CGGCGGGCTT CCGGCTCACC GGAGACCCCC TCAACCTCAG TCCCGCCGTC
GCCTCGCTCG TGTTCCTCTG CTACGCGATG GGATCGGTGT CGTCGGCCAC CGCGGGCAGG
TTGGTGGCAC GGTACGGCAG GATGCGCTGC CTGCTCATGT CGCTGGCGTT GACCGCGGTG
GGCGCGGCGG CCACGGTGTG GGGCTCGCTC GCCGTCGTCA TCGCGGGGTT CGTGGTCTTC
ACCGGGGGGT TCTTCGCGGC GCACGCGGTC GCCAACGGGT GGGCCGCGGC CGAGGCTCCG
ACACAGGCGC GCGCGTCGGC GTCCGGACTG TACACGTTGG CGTACTACCT GGGCAGCAGC
GTCGGCGGCA CGGTGGGCAG CATCGTCTAC GGGTACGCGG GCTGGACGTG GCTGGTCGGC
ACCGTCGCGG TGTGGCTGGG ATGCGCGGCG GCTGGCGTGG TGTTGCTGGC GCGACGGCAT
GCGTCCGAGA CGGTCTGA
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| Protein sequence | MNARRVTVAV AAAGICSFSL LYAPQPLLPQ LAAEFGLDPG AASLAVSMGT GGLAAAVVPI
AVLSEIVGKR PVVIVSVLAS ALLGLVLPFA PSYEVLLVLR VLQGIAIAGF PGVAAAYLTE
VLGRAGVAGA VGAMIAGNTV GGMLGRLVAG GVTERLGWHG ALAVVGGIGL LCALLTVATL
PRVPRASRRD REGAGGVGEA TESLGSKLRA VLSGFRVGLR RPVLWAQYGV ALLAMGSFVA
LYNAAGFRLT GDPLNLSPAV ASLVFLCYAM GSVSSATAGR LVARYGRMRC LLMSLALTAV
GAAATVWGSL AVVIAGFVVF TGGFFAAHAV ANGWAAAEAP TQARASASGL YTLAYYLGSS
VGGTVGSIVY GYAGWTWLVG TVAVWLGCAA AGVVLLARRH ASETV
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