Gene Svir_06330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06330 
Symbol 
ID8385971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp648537 
End bp649475 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content69% 
IMG OID644974730 
Productputative glucosyl-3-phosphoglycerate synthase 
Protein accessionYP_003132531 
Protein GI257054699 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAT CGACATCCAT GGATGAGCGC TGGTTCCGTC GCCGCACCTG GCAATCTCCG 
CAGTGGAGTG TGTCGGAGCT GGTGTCGGCC AAGCGGGGGC GGACGGTGTC GGTGGTGCTG
CCCGCGCTGA ACGAGGAGGC CACGGTGGGT TCCGTGGTGG CCTCTGTACG TCCTCTGGTC
GGCGGCTTGG TGGACGAGCT GGTGGTGTTG GACTCCGGGT CGAGCGACGG TACGGCCGCC
GAGGCCGAGC GTGCGGGAGC GACCGTCGTC CGCCGTGAGG AGGTGCTCGT CGATCTCGCG
CCCCTTCCGG GCAAGGGGGA GGCGCTGTGG CGGTCGTTGG CGGCGACGAC GGGTGACCTC
GTCGTGTTCC TCGACTCCGA TCTGGTCGAT CCCGATCCGG GTTTCGTGCC CGCGTTGCTC
GGCCCGTTGC TGTGTGAGCC CGGTGTCGAG CTGGTGAAGG GTTTCTACCG CAGGCCGCTG
CGGTTGGAGG AGGACGAACT CACCACCGGC GGGGGACGGG TCACCGAGTT GTTGGCTCGT
CCGCTGTTGG CCGCGCTGCG TCCGTCCCTG TCCGGGTTGG TGCAACCCCT GGGAGGGGAG
TACGCCGCCA CCCGGCGGTT GTTGGAGGCG TTGCCGTTCG CCTGCGGTTA CGGCGTGGAG
ATCGGGCTGT TGCTCGACAC CGAGGCCACG TGTGGACTCG ATGCGCTCGC CCAGGTGAAT
CTCGGGGTGC GGAAACACCG CAACCGATCG TTGACGCAGC TCGGGGTCAT GGCCCGCGAG
ATCCTCGGCA CCGCTTTGTC ACGCTGCGGG GTGGACGCGC CCGGTGTGCC GGAGCTGACC
CAGTTCGTGC AGGTCGGAGG CGAGTGGATA CCCGATGTCA GCCCGGTGCC GCTGATCGAT
CGGCCGCCGA TGCGGCAGGT GCTGGCGAAG CGCACGTGA
 
Protein sequence
MARSTSMDER WFRRRTWQSP QWSVSELVSA KRGRTVSVVL PALNEEATVG SVVASVRPLV 
GGLVDELVVL DSGSSDGTAA EAERAGATVV RREEVLVDLA PLPGKGEALW RSLAATTGDL
VVFLDSDLVD PDPGFVPALL GPLLCEPGVE LVKGFYRRPL RLEEDELTTG GGRVTELLAR
PLLAALRPSL SGLVQPLGGE YAATRRLLEA LPFACGYGVE IGLLLDTEAT CGLDALAQVN
LGVRKHRNRS LTQLGVMARE ILGTALSRCG VDAPGVPELT QFVQVGGEWI PDVSPVPLID
RPPMRQVLAK RT