Gene Svir_06310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06310 
Symbol 
ID8385969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp647254 
End bp647823 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content68% 
IMG OID644974728 
Productconserved hypothetical protein, DprA/Smf-related, family 2 
Protein accessionYP_003132529 
Protein GI257054697 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGA TCTGCGTCTT CTGTGGTTCG GCCTCGGGTA AGGACCCCGG CTACGCCGAC 
GAGGCCGCCG CCGTGGGCAG GCTGCTGGCC GAACGCGGTA TCGGCGTCGT CTACGGCGGC
GGACAGGTCG GCCTCATGGG GGTCGTGGCC GACGCGGCGC TGGAGGCCGG GGGAGAGGTC
ATCGGGGTGA TCCCGAAGCA CCTGATGCGT GCCGAACTCG CCCACCACGG TCTCACCGAA
CTCCACGTGG TGGAGGACAT GCACAAACGC AAGGCCACGA TGGCCCGGTT GTCCGACGCC
TTCCTCGCGT TGCCAGGCGG GGCGGGCACG TTGGAGGAGC TGTTCGAGGT GTGGACCTGG
GCGCAGCTCG GTCTGCACGC CAAGCCGGTG GGGCTGCTCG ACGTGGGCGG TTACTACACG
AAGCTGGTCG AATTCCTCGA CCACATGGTG ATCGAGGGCT TCCTGGGTGA GGCCAGCCGC
GACCTCGTCA TCGTCGGCTC GGACCCGCGT GCCGTGCTCG ACGCCTTCTC CCGGCACAGC
TACACGCCGG TGGACAAGTG GGCGGGCTAG
 
Protein sequence
MKRICVFCGS ASGKDPGYAD EAAAVGRLLA ERGIGVVYGG GQVGLMGVVA DAALEAGGEV 
IGVIPKHLMR AELAHHGLTE LHVVEDMHKR KATMARLSDA FLALPGGAGT LEELFEVWTW
AQLGLHAKPV GLLDVGGYYT KLVEFLDHMV IEGFLGEASR DLVIVGSDPR AVLDAFSRHS
YTPVDKWAG