Gene Svir_06300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06300 
Symbol 
ID8385968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp646471 
End bp647253 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID644974727 
Productconserved hypothetical protein, DprA/Smf-related, family 2 
Protein accessionYP_003132528 
Protein GI257054696 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGG TGACGCGCAA CATCAACAAC GGTGACGACA GTCCGCCTGA ACGACACCGT 
GGCCCAGTCG TCCTGCGCAG AGGCAGCCAA GCGGAGAAAA CCACCACGGA CCAGCGGCTG
CTCGATTCCC GTGGGCCCTC CGACTGGGTT CATACGGATC CGTGGCGAGT GCTGCGCATC
CAGGCCGAGT TCGTCGAGGG GTTCGGAGCG CTCGCCGAGA TTCCGCGTGC GGTGACCGTG
TTCGGTTCGG CCCGTACGCC CCGGGACCAT CCCGAATACG AACTCGGTCG CAAGATCGGC
GCGGCGTTGG CCGAGATCGG ATTCGCCGTG ATCACCGGTG GGGGCCCCGG CACGATGGAG
GCCGTGAACC GGGGCGCGTC CGAGGCCGGT GGACTGTCCG TCGGACTCGG TATCGAGCTG
CCGTTCGAAC AGGGGTTGAA CCGGTGGGTG GACCTCGGGG TGAACTTCCG CTACTTCTTC
ACGCGGAAGA CGATGTTCAT CAAGTACTCG CAGGCGTTCA TCTGTCTTCC CGGCGGGTTC
GGCACGCTCG ACGAGTTGTT CGAGGCGTTG ACGCTGGTGC AGACCAAGAA GGTCACCAAG
TTCCCGGTGG TGCTGTTCGG CTCGAAGTAC TGGGGCGGGT TGTACGAGTG GGTGCGTGAC
ACCATGCTCG CCGAAGGCAA GATCAACGAG CGGGACCTCC GACTGCTGCA CGTCACCGAT
GACATCGACG AGGCGGTGGG TGTGGTGAAG GAAGCCTACA AAGCCTGGGA GGACACCCAC
TAG
 
Protein sequence
MTEVTRNINN GDDSPPERHR GPVVLRRGSQ AEKTTTDQRL LDSRGPSDWV HTDPWRVLRI 
QAEFVEGFGA LAEIPRAVTV FGSARTPRDH PEYELGRKIG AALAEIGFAV ITGGGPGTME
AVNRGASEAG GLSVGLGIEL PFEQGLNRWV DLGVNFRYFF TRKTMFIKYS QAFICLPGGF
GTLDELFEAL TLVQTKKVTK FPVVLFGSKY WGGLYEWVRD TMLAEGKINE RDLRLLHVTD
DIDEAVGVVK EAYKAWEDTH