| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_06140 |
|---|
| Symbol | |
|---|
| ID | 8385952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 631021 |
|---|
| End bp | 632160 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644974711 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_003132512 |
|---|
| Protein GI | 257054680 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.191303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.988146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGAAC TGGTGGTCGT CGCCGAGCAG TTACTCGCCG CCGTCCCGGG CGGCACGGGC
CGCTACACCG CCCAGCTGTT GCGGGCGCTG GCCGCCACCG CGCCGCCCGG CTGGACGGTG
TCGAGCGTCG TCGCCCGACG TCCTGACGTG GAGGCGGCGC GCGTAGAAGG GGTCGCGGGG
CCGCGGGTGC TGCCGTTACC GCCCCGGGCA CTGGTGGCGT CCTGGGAAGC GGGGATACCG
CTGTGGCCGG GCGGCGACGC CGTGCACGCG CCCACCCCAC TGGCCCCGCC GAGGAGCCCC
CGCGGCCGCA CGCTGTCGGT GACGGTGCAC GACACCGTGC CGTGGACCCA TCCTGAGACC
CTCACCCCGC GCGGCGTGAG TTGGCATCGG CGGATGGTCG AGCGGGCGGC ACGGCGGGCG
GACACGGTGG TGGTGCCCAC CGAGGCCGTG GCCCGCGATC TCACCGCGCG AGTCCCGATG
TGCGCCCGCG TCCGCGTGGC ACCCCACGGG GTCACCGACC TCGGCCCACC CACACCCGTG
CCGGGGTTGC CTCGACGCTA CGTGCTGGTG GTGGGGACGG TGGAACCCCG CAAGGGGATC
GACGTGCTCG TCGAAGCCGT CGCCGAACTG ACCCGGTCCG GAGAGGCCGC CACCGACGTA
CCACTGCTGG TGGTGGGACA GCCGGGTTGG GGAGGACTGG ACCCGCTTCG ACTGGCGGCC
CGACACGGAC TGGTCGACGG GCGCGTGCGC GTGCTCGGCC GACTCACCGA CGGCGAACTG
GCGACCGTGC TGCGCAACGC GACCGTGGTG GCCGTGCCGA GCCTGGCGGA GGGCTTCGGG
TTACCGGTCC TGGAGGCCAT GGCCGCGGGC GTCCCCGTGG TCCACTCCGA CGATCCGGCG
TTGGTGGAGG TGTCGGCGAA AGCCGCGGAG GTGGTGCCGC GTGGGGACGC GCGGGCGCTC
GCGACAGGGC TGCGGAAAGT GCTGACCGAT CCCGATCTGG CCGCCGGCCG TGTCGCCGCG
GGGAAAGCCC GGGCCCGTGA CTTCTCGTGG CACCGGGCCG CCACGGTCGT CTGGGACTGC
CACACGGGTA AAGACGGCGG TTTGTCGGAT CCCGGCCAAC AGCACGGCGG GGAGTCGTAG
|
|---|
| Protein sequence | MPELVVVAEQ LLAAVPGGTG RYTAQLLRAL AATAPPGWTV SSVVARRPDV EAARVEGVAG
PRVLPLPPRA LVASWEAGIP LWPGGDAVHA PTPLAPPRSP RGRTLSVTVH DTVPWTHPET
LTPRGVSWHR RMVERAARRA DTVVVPTEAV ARDLTARVPM CARVRVAPHG VTDLGPPTPV
PGLPRRYVLV VGTVEPRKGI DVLVEAVAEL TRSGEAATDV PLLVVGQPGW GGLDPLRLAA
RHGLVDGRVR VLGRLTDGEL ATVLRNATVV AVPSLAEGFG LPVLEAMAAG VPVVHSDDPA
LVEVSAKAAE VVPRGDARAL ATGLRKVLTD PDLAAGRVAA GKARARDFSW HRAATVVWDC
HTGKDGGLSD PGQQHGGES
|
|---|
| |