Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_06110 |
Symbol | |
ID | 8385949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 626389 |
End bp | 627474 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644974708 |
Product | glycosyltransferase |
Protein accession | YP_003132509 |
Protein GI | 257054677 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.224929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.53478 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTAAGC GAGAGTTACG AGTACTGCTG GACGGTACCC CGCTGCTGGG ACACCGCACG GGTATCGGCC GTTACACGGC CTCGTTGTCG GAGGAACTCG CCTCGCTGTC CGGGGTGGAT ACCCGCGCCG TAGGGTTCAC GCTCCGTGGC TGGCGTGGGC TCCGTTCCGT GCTCCCACAC GGGGTACGTG CAAGGGGGAT GCCCGTGGCC GCGCGACTGC TGCGCGCGTC CTGGCTGCGG TCCAACTTCC CCCCGGTGGA GACGTTCGCC GGTCGTGCCG ACGTCGTGCA CGGCACGAAC TTCGTGCTGC CCCCCACCTT GCGGGCCGCA CGCGTACTGA CCATCCACGA CCTGGCGTTC CTCGACGCGC CGGAGGAACT GGCGCCCAGT GATCACAACC TGCCCGAGCT GGTGCGACGC GGCGCGGCCG GAGCCGACGT GATCTGCACC CCGACGGCCG CGGTCGCCGA TTCCGTCGCC GAACGGCTCG ACGTGGACCG TGACAAGATC GAGGTGACAC CGCTGGGGGT GGACGCGGGC TGGTTCACCG GGCGGCCTCC CGGGGAGGAG CGACGTCTCC GCCTCGGCCT GCCCGACGAG TACCTGTTGT TCGCGGGGGC TCCGGGACCG CGCAAGGGAC TCGACTGGCT GCTTCGGGCG CATGCGACCG ACTCGAGTCT GCCGCCGTTG GTGTTCGCGG GGCCGGGGAA CTTCCCCGTC ACCGAGCGCA CAAGACACAT CGGCTATCTG TCCGATGTAG ACCTCCAGCG GGTCGTGGCC GGCGCGTCGG CGTTGGTGCT CCCTTCCCGA GACGAGGGAT TCGGACTGCC CATCCTCGAG GCCATGGCAT GCGACGTGCC CGTGGTGTGC ACCGATGTGC CGTCGCTGCG GGAGGTGTCC GGCGGCCTGG CACGACTGGT GCAGTACGGG GACGTGGACG GGCTCGCCGA GGCACTCCGC CAGGCCGTGG ACGAACCCTC CGCCGCGTCC ACCTCCGCCA CCCGCAGGGC GCACGCGGCC AGTTTCACCT GGCGTCGGTG CGCCGAGGCC ACGTTGGCGG CCTATCGCCG CGCCGTGTCC TCTTAA
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Protein sequence | MAKRELRVLL DGTPLLGHRT GIGRYTASLS EELASLSGVD TRAVGFTLRG WRGLRSVLPH GVRARGMPVA ARLLRASWLR SNFPPVETFA GRADVVHGTN FVLPPTLRAA RVLTIHDLAF LDAPEELAPS DHNLPELVRR GAAGADVICT PTAAVADSVA ERLDVDRDKI EVTPLGVDAG WFTGRPPGEE RRLRLGLPDE YLLFAGAPGP RKGLDWLLRA HATDSSLPPL VFAGPGNFPV TERTRHIGYL SDVDLQRVVA GASALVLPSR DEGFGLPILE AMACDVPVVC TDVPSLREVS GGLARLVQYG DVDGLAEALR QAVDEPSAAS TSATRRAHAA SFTWRRCAEA TLAAYRRAVS S
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