Gene Svir_06110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_06110 
Symbol 
ID8385949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp626389 
End bp627474 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content70% 
IMG OID644974708 
Productglycosyltransferase 
Protein accessionYP_003132509 
Protein GI257054677 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.224929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.53478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAAGC GAGAGTTACG AGTACTGCTG GACGGTACCC CGCTGCTGGG ACACCGCACG 
GGTATCGGCC GTTACACGGC CTCGTTGTCG GAGGAACTCG CCTCGCTGTC CGGGGTGGAT
ACCCGCGCCG TAGGGTTCAC GCTCCGTGGC TGGCGTGGGC TCCGTTCCGT GCTCCCACAC
GGGGTACGTG CAAGGGGGAT GCCCGTGGCC GCGCGACTGC TGCGCGCGTC CTGGCTGCGG
TCCAACTTCC CCCCGGTGGA GACGTTCGCC GGTCGTGCCG ACGTCGTGCA CGGCACGAAC
TTCGTGCTGC CCCCCACCTT GCGGGCCGCA CGCGTACTGA CCATCCACGA CCTGGCGTTC
CTCGACGCGC CGGAGGAACT GGCGCCCAGT GATCACAACC TGCCCGAGCT GGTGCGACGC
GGCGCGGCCG GAGCCGACGT GATCTGCACC CCGACGGCCG CGGTCGCCGA TTCCGTCGCC
GAACGGCTCG ACGTGGACCG TGACAAGATC GAGGTGACAC CGCTGGGGGT GGACGCGGGC
TGGTTCACCG GGCGGCCTCC CGGGGAGGAG CGACGTCTCC GCCTCGGCCT GCCCGACGAG
TACCTGTTGT TCGCGGGGGC TCCGGGACCG CGCAAGGGAC TCGACTGGCT GCTTCGGGCG
CATGCGACCG ACTCGAGTCT GCCGCCGTTG GTGTTCGCGG GGCCGGGGAA CTTCCCCGTC
ACCGAGCGCA CAAGACACAT CGGCTATCTG TCCGATGTAG ACCTCCAGCG GGTCGTGGCC
GGCGCGTCGG CGTTGGTGCT CCCTTCCCGA GACGAGGGAT TCGGACTGCC CATCCTCGAG
GCCATGGCAT GCGACGTGCC CGTGGTGTGC ACCGATGTGC CGTCGCTGCG GGAGGTGTCC
GGCGGCCTGG CACGACTGGT GCAGTACGGG GACGTGGACG GGCTCGCCGA GGCACTCCGC
CAGGCCGTGG ACGAACCCTC CGCCGCGTCC ACCTCCGCCA CCCGCAGGGC GCACGCGGCC
AGTTTCACCT GGCGTCGGTG CGCCGAGGCC ACGTTGGCGG CCTATCGCCG CGCCGTGTCC
TCTTAA
 
Protein sequence
MAKRELRVLL DGTPLLGHRT GIGRYTASLS EELASLSGVD TRAVGFTLRG WRGLRSVLPH 
GVRARGMPVA ARLLRASWLR SNFPPVETFA GRADVVHGTN FVLPPTLRAA RVLTIHDLAF
LDAPEELAPS DHNLPELVRR GAAGADVICT PTAAVADSVA ERLDVDRDKI EVTPLGVDAG
WFTGRPPGEE RRLRLGLPDE YLLFAGAPGP RKGLDWLLRA HATDSSLPPL VFAGPGNFPV
TERTRHIGYL SDVDLQRVVA GASALVLPSR DEGFGLPILE AMACDVPVVC TDVPSLREVS
GGLARLVQYG DVDGLAEALR QAVDEPSAAS TSATRRAHAA SFTWRRCAEA TLAAYRRAVS
S