| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05830 |
|---|
| Symbol | |
|---|
| ID | 8385921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 596700 |
|---|
| End bp | 597218 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644974680 |
|---|
| Product | acetyltransferase, ribosomal protein N-acetylase |
|---|
| Protein accession | YP_003132481 |
|---|
| Protein GI | 257054649 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGG CCGAGATCAA CGCGGGCACC CTCTACCTGC GTCAGCTCAG GGCCGATGGC
GCGATCGATG ATCGCCCCGC CCTGGTGGAG GCGTTCGCCG ACCCAGTGAT ACGCAATTTC
GTACGGAATT ACGTCGTCGA TTCCGTGGAA GCGGCGGAGG AATACGTGCG GCGACGTGCC
GAGGAATGGA AACGCGATCA GCGGTGTTCG TGGGCCGTGG CCGAGCCGAC CACGGGCGAA
CTGCTGGGTG AGGTGGGATT GAAAGAACTC GATCTCGCCG CGGGCACCGC GGAAGTGGCC
GTGTGGGTCC ACCCCTCCGC CCGGGGACGC GGTGTCGCGA CCACCGCCGT CGGCGCGGCC
GTGCGCTTCG GTTTCGGCGC GCTGGGACTC TCCCACATCG ACTACGTCCA TGAGCCGGAC
AACGCCGCGT CCCGGGAGGT CGCCCGAAAA AGCGGATTCA CTCTCCTCGG CCCCGACGGC
GAGAACGTGC GCTGGCGACA AACGGCCGAG AACGGCTGA
|
|---|
| Protein sequence | MEPAEINAGT LYLRQLRADG AIDDRPALVE AFADPVIRNF VRNYVVDSVE AAEEYVRRRA
EEWKRDQRCS WAVAEPTTGE LLGEVGLKEL DLAAGTAEVA VWVHPSARGR GVATTAVGAA
VRFGFGALGL SHIDYVHEPD NAASREVARK SGFTLLGPDG ENVRWRQTAE NG
|
|---|
| |