| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05790 |
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| Symbol | |
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| ID | 8385917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 592272 |
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| End bp | 594035 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644974676 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_003132477 |
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| Protein GI | 257054645 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.837912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGTC CGCCGGTCGA GGTCCGCCGT GACGAGGAGG CGAAAGTGAC TGTGTCGTTG
GGACCGGTGA ACCGCGAGGA GTCATGGCAG CGGTTGGGCG ACGAGGACTT CGACCTCGTC
GTCATCGGCG GTGGTGTCGT AGGGGTGGGC ACGGCTCTCG ATGCGGCCAC CCGGGGGTTG
CGGGTCGCCC TCGTGGAGGC CCGGGACCTC GCCTCGGGGA CGTCGAGCAG GTCGAGCAAG
CTGTTCCACG GCGGGCTGCG CTACCTGGAA CAACTCGAAT TCGGACTGGT ACGGGAGGCG
CTGCGGGAAC GGGAGTTGAT GCTCACCACC ATCGCCCCCC ATCTGGTGAA ACCGGTGAGC
TTTCTGTACC CGTTGACGCA CCGGGTGTGG GAACGGCCGT ACACGGCGAC GGGCCTGTTG
TTGTACGACA CGATGGGTGG TGCCCGGTCG GTGCCCGGGC AGAAGCACCT GACGCGCGCC
GGGGCGTTGC GCATGGTGCC GGCGTTGAAA CGCGACGCGC TCATCGGCGG CATCCGGTAC
TACGACGCGT CGGCCGACGA CGCTCGGCAC ACGATGATGG TGGCGCGGAC GGCGGCGCAC
TACGGTGCCG TGGTGCGCAC GTCCACACAG GTGGTGGGGT TCCTGCGGGA AGCGGACCGC
GTGACCGGGG TACGGGTGCG CGACGTGGAG GACGGCCGGG AAACCGACGT GCGGGCGTCC
GTCGTGGTCA ACTGCACGGG AGTGTGGACG GACGAATTGC AGCATCTGGC CGGGAGCCGG
GGCCGGTTCC GGGTGCGGGC CAGCAAGGGC GTACACATCG TGGTGCCGCG GGACCGCATC
GTGTCCGAGA CCGGGCTGAT CCTGCGTACC GAGAAGTCGG TGTTGTTCGT CATCCCGTGG
CGCAGCAACC ACTGGATCGT GGGCACCACC GACACCGACT GGAACCTCGA CCTCGCGCAT
CCGGCCGCGA CGAAGAACGA CATCGACTAC ATCCTGTCCC ACGTCAACAA GGTCTTGGCG
ACCCCGTTGA CGCATGACGA CATCGAAGGC GTCTACGCGG GACTGCGGCC GTTGCTGGCC
GGGGAGAGCG AGGAGACGTC GAAGTTGTCG CGGGAGCACG CGGTGGCGCG GGTCGCCCCC
GGACTGGTCG CCATCGCGGG TGGCAAGTAC ACGACGTACC GGGTCATGGC CGCCGACGCC
GTGGACGCCG CCGCGGCCGA CCTGCCGGGG CGGCCCCGTC AGTCCATCAC GGACAAGGTT
CCACTGGTGG GCGCCGACGG CTACCACGCG TTGGTGAACC AGGCGGATCA GCTGGCCGCC
AAGCACGGTC TACACCCGTA TCGCGTGCGG CACCTGCTCG ACCGGTACGG CTCGCTCGTG
CACGAGGTGC TCGCCCAGGC CGACGGCAAG CCGGAACTGC TGAAGCCCAT CGACTCCGCG
CCCGATTACC TGAAGGTCGA AGCCGTGTAC GCGGCCAGCC ACGAGGGCGC CCTGCACCTG
GAGGACGTCC TGGCGCGGCG GACCCGCATC TCGATCGAGT ACCCGCACCG GGGTGTGGAC
TGCGCGAAGC AGGTCGCGGA CCTGATGGGG GACGTGCTCA GCTGGTCACA GGAGACCCGG
GCCCGGGAGG TCGAACTGTA CGAGGCCAGG GTCAAGGCCG AACGGGAGTC GCAGTCCGAG
CCGTCCGACG AAAGCGCCGA CGCGCGTCGG TCCGCGGCAC CGGAGGCCCG TTCCGGACTG
GTGGATCTGA GCGCCACGGC GTAG
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| Protein sequence | MSSPPVEVRR DEEAKVTVSL GPVNREESWQ RLGDEDFDLV VIGGGVVGVG TALDAATRGL
RVALVEARDL ASGTSSRSSK LFHGGLRYLE QLEFGLVREA LRERELMLTT IAPHLVKPVS
FLYPLTHRVW ERPYTATGLL LYDTMGGARS VPGQKHLTRA GALRMVPALK RDALIGGIRY
YDASADDARH TMMVARTAAH YGAVVRTSTQ VVGFLREADR VTGVRVRDVE DGRETDVRAS
VVVNCTGVWT DELQHLAGSR GRFRVRASKG VHIVVPRDRI VSETGLILRT EKSVLFVIPW
RSNHWIVGTT DTDWNLDLAH PAATKNDIDY ILSHVNKVLA TPLTHDDIEG VYAGLRPLLA
GESEETSKLS REHAVARVAP GLVAIAGGKY TTYRVMAADA VDAAAADLPG RPRQSITDKV
PLVGADGYHA LVNQADQLAA KHGLHPYRVR HLLDRYGSLV HEVLAQADGK PELLKPIDSA
PDYLKVEAVY AASHEGALHL EDVLARRTRI SIEYPHRGVD CAKQVADLMG DVLSWSQETR
AREVELYEAR VKAERESQSE PSDESADARR SAAPEARSGL VDLSATA
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