Gene Svir_05760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05760 
Symbol 
ID8385914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp588740 
End bp589531 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID644974673 
Productlactoylglutathione lyase family protein 
Protein accessionYP_003132474 
Protein GI257054642 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCC GCGACACTCC TTACCCCGAC GGGATGCCCT GCTGGGTCGA TCTGCGGGTT 
CCCGATCCCC GGATGGCCAT GGACTTCTAC GGCGCGCTGT TCGGTTGGGC CTTCGCCGAC
CAGGGCGACG AGACGGGTAA CTACCTGTTG TGCCTGGTGA ACGGTCGGAT AGTCGCCGGG
CTCGGCGGGT CGCCACCGGA CCAGCAGGCC CCTCCCGTGT GGACCACCTA TCTCGCCACG
TCGAATGTGG ACGCCACAGC GGAGAGGGTC CGAAACGCGG GTGGACGGTT GTTGACCGAA
CCGACGGACA CGCTGTGGGA GAGTCGGATG GCGATCGCCG CGGACCCCAC GGGTGCGGTG
TTCGGACTGT GGCAGGCGGG CCGGGTCATC GGGGCACAAC TGACCCAAGC ACCGTCGGCT
TTGATGTGGA ACGAATGCCT GACCCGCGAC TTCTCCGCGG CGGAGGAGTT CTACGGGCAC
GTGTTCGGTT ACGCGATCGG TCGACAGGAG GACCAGGAAC CGGCCTACGG TACGTTCGTG
TCCGACGAGC GCATCGTCGG TGGGCTGGGG GAGCTCTCCC CCGAGGTGCC GGCGGACGTA
CCGTCGCACT GGATGACGTA CTTCGGCGTC GTCGACACGG ACGCGGTGGC GGCCCGGGCG
ATCGAACTCG ACGGCACCGT CATCGCCCCT CCGAAGGACA GTCCGTACGG GCGTGTCTCG
GCTCTTTCGG ACAATCAGGG CGTGGCGTTC TCGGTGATCA CCGTGACCGC CGAGCCGGAA
CCCGAGGCCT GA
 
Protein sequence
MIVRDTPYPD GMPCWVDLRV PDPRMAMDFY GALFGWAFAD QGDETGNYLL CLVNGRIVAG 
LGGSPPDQQA PPVWTTYLAT SNVDATAERV RNAGGRLLTE PTDTLWESRM AIAADPTGAV
FGLWQAGRVI GAQLTQAPSA LMWNECLTRD FSAAEEFYGH VFGYAIGRQE DQEPAYGTFV
SDERIVGGLG ELSPEVPADV PSHWMTYFGV VDTDAVAARA IELDGTVIAP PKDSPYGRVS
ALSDNQGVAF SVITVTAEPE PEA