| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05670 |
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| Symbol | |
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| ID | 8385905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 578454 |
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| End bp | 580322 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644974664 |
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| Product | methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| Protein accession | YP_003132465 |
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| Protein GI | 257054633 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG GGGCTGAGGT CGGAGCCGAA CTGGCGCTCG CGGCCGAGTT CGACGCACCG
AGCCGACGGG ACTGGGAACG ACTCGTCGAG AAGGTCCTCG ACAGGGTTGG TGGTGACTGG
GATCGGCTGG TGACCACTAC GTACGACGGG ATCGAGATCC AGCCGCTCTA CACCGTCGAC
GACCCGGTAC CGCCCGCGGG CCTTCCCGGC CTGCCTCCGT TCGTTCGTGG GGCTCGTCCT
GACGGCCACG TGCTCACCGG CTGGGACGTG CGGGCCCGGT ACGACGTCGG CGAGAACTTC
GACGAATCCG CTGCCGCCGC TCTCAACGAA GCGGTGCTGA CCGACCTCGA CGGCGGCGTC
ACGTCGCTGT GGCTGCGGGT GGGCGACGGC GAGGACGGTG CCGTGCCGGT GTCCTCGCTC
GACGCCGTCC TGCAGGAGGT GCGTCTCGAC CTCGCTCCGA TCGTGCTCGA CGCGGGCGAG
GAGTACGAGC GCGCGGCGCA GGCCTTGCTC GCGTTGTGTT CCGAACACGG CGTGCCCGAC
ACCGAGGTGG CGGGCAACCT CGGCGCCGAC CCGATCGGCG TCCACGCCCG CACCGGCCGC
GCGCAGGACG TGAGCGCCGC CGCCGCGTTC ACGGCCAAGG TCGCCGAACG CTACCCGAAA
CTGTCCACGT TGGTGGCCGA CGGTCTGCCC TACCACGAGG CCGGAGGTTC CGACGCCCAG
GAACTCGGTG CCGTGCTCGC CACGGCGGTG GCCTATCTCC GGGCCGCGAC CGAGGCCGGC
CTCGACGTCG CCACGGCCGC CGCACGGATC GAATTCCGGC TCGCCGCGAC CACCGACCAG
TTCAACACCA TCGCGAAGCT CCGCGCCGCG CGCAGGGCGT GGGCGCGCGT ACTGGAGGTG
TGCGGTGCGC CCGGCATCGC CATGCGCCAA CACGCCGTCA CGTCGCCCGC CATGCTGACC
CGCCGCGATC CCGAGGTGAA CCTGCTGCGC ACCACCGTCG CCTGCTTCGC GGCCGGTGTC
GGCGGTGCCG ACGCGGTGAC CGTGTTGCCG TTCGACCACG CGATCGGATT ACCCGACAAG
TTCTCCCGCA GGCTCGCCCG CAACACCCAG GCCATCCTGC TGGAGGAGAG CAAACTCGCC
AACGTGATCG ACCCCGCGGG CGGCTCGTGG TACGTCGAGA ACCTCACCGA CGCCCTCGCA
CACGCGGCCT GGGACGAGTT CACCGCCATC GAGAAGGCGG GCGGTATCGA GGCCGAACTC
GCTTCGGGCG CGCTGGCCGA CCGTCTGGCC GACACGTGGC GGAGGCGATC GCGGCGGATC
GCGACCCGAC GTGACCCGAT CACCGGCGTC AGCGAGTTCC CGTTGCTCGA CGAGAACACC
GTCGAGCGGA CACCCCGACC CGCAGGGCAG GGCGGGGGCC TGCCGAGGGT CCGGTACGCC
CAGGACTACG AACGGTTGCG TGACCGGTCC GATGCCCACC TCGCCGAGCA CGGCAGCCGA
CCGAAGGTCT TCCTCGCCAC GCTCGGACCA CTGGCCCAGC ACACGGCCCG CGCCACGTTC
GCGGCGAACC TCTTCCAAGC GGGCGGGATC GAGCCGGTGA ATCCGGGGCT CGCCGACCCG
TCCGTCGAAG ACCTCGTGGC CGCCTTCCGT GACAGCGGAA CCCCCGTGGC CTGCCTGTGC
GGCAGCGACG TCGCGTACGG CGAGAGCGCC GAGGCGGTGG CGGCCGCCCT GCGTTCGGCG
GGCGCCACCA CGGTGCTGCT CGCGGGTAAA CCGGCTGACA TCGACGGTGT CACGGGTTAC
GTCCACACCG GGTGCGACGC GCTCGCCGTC CTCTCCGACA CTCTCGACAC CCTGGGAGTC
GCCCAATGA
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| Protein sequence | MSNGAEVGAE LALAAEFDAP SRRDWERLVE KVLDRVGGDW DRLVTTTYDG IEIQPLYTVD
DPVPPAGLPG LPPFVRGARP DGHVLTGWDV RARYDVGENF DESAAAALNE AVLTDLDGGV
TSLWLRVGDG EDGAVPVSSL DAVLQEVRLD LAPIVLDAGE EYERAAQALL ALCSEHGVPD
TEVAGNLGAD PIGVHARTGR AQDVSAAAAF TAKVAERYPK LSTLVADGLP YHEAGGSDAQ
ELGAVLATAV AYLRAATEAG LDVATAAARI EFRLAATTDQ FNTIAKLRAA RRAWARVLEV
CGAPGIAMRQ HAVTSPAMLT RRDPEVNLLR TTVACFAAGV GGADAVTVLP FDHAIGLPDK
FSRRLARNTQ AILLEESKLA NVIDPAGGSW YVENLTDALA HAAWDEFTAI EKAGGIEAEL
ASGALADRLA DTWRRRSRRI ATRRDPITGV SEFPLLDENT VERTPRPAGQ GGGLPRVRYA
QDYERLRDRS DAHLAEHGSR PKVFLATLGP LAQHTARATF AANLFQAGGI EPVNPGLADP
SVEDLVAAFR DSGTPVACLC GSDVAYGESA EAVAAALRSA GATTVLLAGK PADIDGVTGY
VHTGCDALAV LSDTLDTLGV AQ
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