Gene Svir_05500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05500 
Symbol 
ID8385888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp558688 
End bp560127 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content66% 
IMG OID644974647 
Productaldehyde dehydrogenase (acceptor) 
Protein accessionYP_003132451 
Protein GI257054619 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCAGT GGGAATACGC ACCCGCGCCC GAATCGCGCG ACATCGCCAA TCTGAAACCG 
ACGTACCGAC CGTTCATCGG TGGTGAGTTC GTCGACGGCT CGGGTGAGCC GTTGCAGACG
ATCAACCCGG CCACCGAGGA AGTGCTGGCC GAGGTCGGAA CGGCCAGTGT GTCCGATGTG
GACAACGCGG TGAAAGCGGC GAGGAAGGCC TACGACCGCG TGTGGGGACC GATGCCCGGC
ACCGAACGCG CCAAGTACAT CTTCCGTATC GCCCGCCTCA TCCAAGAGCG AGCGCGAGAA
CTCGCCGTGC TGGAGACGTT GGACAACGGT AAGCCGATCA AGGAATCGCG CGACACCGAC
ATCCCGACCG CCGCGGCGCA CTTCTTCTAC CACGCGGGCT GGGCCGACAA ACTCGAGTAC
GCGGGCCTGG GGCCCCAGCC CCGTCCACTC GGCGTGGCAG GCCAGGTCAT CCCGTGGAAC
TTCCCGCTGC TCATGCTGGC CTGGAAGGTC GCTCCCGCCC TGGCCACCGG CAACACGGTG
GTGCTCAAAC CCGCCGAGAC GACCCCGTTG ACGGCGCTGG TGTTCGCCGA GATCTGCCAG
CAGGCCGACC TGCCCCCGGG TGTGGTGAAC ATCGTGCCCG GAGCCGGCGA CATCGGAGCC
GCGGTGGTCG AACACCCGGA CGTCGACAAA GTCGCGTTCA CCGGCTCCAC CGCGGTCGGC
AAGCACATTC AGCGCACCCT CGCGGGGACC CGCAAACGCC TCACGCTCGA ACTCGGCGGC
AAGGCGGCGA ACATCGTCTT CGACGATGCC CCGCTCGACC AGGCGGTGGA AGGGATCGTC
AACGGGATCT TCTTCAACCA GGGCCACGTG TGCTGCGCGG GCTCCCGGCT GCTGGTGCAG
GAGTCGATCG CCGAGGAACT GCTGGACAAA CTCCGCGCGC GGATCTCCAC ACTGCGACTC
GGCGACCCGC TCGACAAGAA CACCGACATC GGCGCCATCA ACTCCGCCGA ACAACTCGCC
AAGATCGAGG ACCTGGTCGC CTCCGGGGAA CGCGATGGTG CACAACGGTG GAGCAGCCCG
TGCACGCTGC CCGACAAGGG GTTCTTCTTC GCGCCAACGG TGTTCTCGAA CGTCGAGCAA
TCCATGCGCA TCGCACGCGA GGAGATCTTC GGTCCCGTGC TGTCGGTGCT GACGTTCCGC
ACCCCGGACG AAGCCGTCGC CAAGGCGAAC AACACGCCCT ACGGCCTATC GGCGGGAGTG
TGGACCGAGA AGGGGTCACG CATCCTCTGG ATGGCGAATC GACTGCGCGC GGGCGTGGTG
TGGGCCAACA CGTTCAACCG GTTCGATCCC ACCGCGCCGT TCGGCGGATA CAAGGAATCA
GGATTCGGGC GCGAGGGCGG CCGGACGGGT CTGGAGGCGT ACCTGCATGT CCAGGGTTGA
 
Protein sequence
MSQWEYAPAP ESRDIANLKP TYRPFIGGEF VDGSGEPLQT INPATEEVLA EVGTASVSDV 
DNAVKAARKA YDRVWGPMPG TERAKYIFRI ARLIQERARE LAVLETLDNG KPIKESRDTD
IPTAAAHFFY HAGWADKLEY AGLGPQPRPL GVAGQVIPWN FPLLMLAWKV APALATGNTV
VLKPAETTPL TALVFAEICQ QADLPPGVVN IVPGAGDIGA AVVEHPDVDK VAFTGSTAVG
KHIQRTLAGT RKRLTLELGG KAANIVFDDA PLDQAVEGIV NGIFFNQGHV CCAGSRLLVQ
ESIAEELLDK LRARISTLRL GDPLDKNTDI GAINSAEQLA KIEDLVASGE RDGAQRWSSP
CTLPDKGFFF APTVFSNVEQ SMRIAREEIF GPVLSVLTFR TPDEAVAKAN NTPYGLSAGV
WTEKGSRILW MANRLRAGVV WANTFNRFDP TAPFGGYKES GFGREGGRTG LEAYLHVQG