| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05430 |
|---|
| Symbol | |
|---|
| ID | 8385881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 549378 |
|---|
| End bp | 549782 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644974640 |
|---|
| Product | cytidine deaminase |
|---|
| Protein accession | YP_003132444 |
|---|
| Protein GI | 257054612 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0295] Cytidine deaminase |
|---|
| TIGRFAM ID | [TIGR01354] cytidine deaminase, homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.764877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGG AGGTGACGGC GGACGACTGG GAGCGGCTGC GTTCCGAGGC GGTGGCGGCG
GCACGGAAGG CGTACGCGCC GTACTCCGGT TTGCAGGTCG GTTCCGCCGC TTTGACCGAC
GACGGGCGGA TCGTCACCGG ATGCAATGTG GAGAACGCCT CCTATCCGGT GGGACTGTGC
GCCGAGGCCA CGATGAGCGG GCAGTTGCGG TTGTCCGGTG GTGGCCGGTT CGTCGCGGTG
ACCTGCCGTT CCGGCGAGGG GGAGCCGTTG ATGCCCTGTG GTCGTTGCCG GCAGCTGTTG
TTCGAGTTCG GCGGGCCCGG ATGTCTGGTC GACACCCCGC GCGGGGTGCA GCCGATGTCC
GAGGTACTGC CCCAGGCGTT CGGCCCTGAG GACCTGCCGT CATGA
|
|---|
| Protein sequence | MSAEVTADDW ERLRSEAVAA ARKAYAPYSG LQVGSAALTD DGRIVTGCNV ENASYPVGLC
AEATMSGQLR LSGGGRFVAV TCRSGEGEPL MPCGRCRQLL FEFGGPGCLV DTPRGVQPMS
EVLPQAFGPE DLPS
|
|---|
| |