| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05390 |
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| Symbol | |
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| ID | 8385877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 544210 |
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| End bp | 545316 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974636 |
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| Product | nucleoside-binding protein |
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| Protein accession | YP_003132440 |
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| Protein GI | 257054608 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.55516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCG TACTGACGTT GGCAGCCTGT GCCAAAGACT CGGGTAACGA CAACGCCGCG
AGCGGCGGAG GTGAATCGAG TGGCGAATGT GTGACGGCCG CCGCGCCGCC TCGGCCCGAG
GCCGGCGAGG GGAAGCGTGA GAAGGAGGCG GAGGACGTCG ACGCCAGCGA CCTCAAGGTC
GGGCTCGCGT TCGACGTGGG CGGCCGTGGG GACGCGTCGT TCAACGACGC CGCGGCGGCC
GGTGTCGACA AGGCCGTCGA AGAGCTGGGC GTGAGCGACA CGACCGAGAG CACGGCCACG
GGCACCGAGT CGGAGGACGC CAAGCAGCAG CGCCTGACCC AGATGGCCCA ACAGGGCTAC
AACCCGATCA TCGCCGTCGG GTTCGCCTAC TCCGACGCGA TAGATGCCGT GGCACCGAAG
TTCCCCGACA CCCAGTTCGC CATCGTGGAC GACGACTCGG TGGACCAGCC GAACGTCACC
CCGCTGGTGT TCACCGAGGA GCAGGGCTCG TTCCTCGTCG GCGTCGCGGC CGTCTACAAG
AGCGAGAACT GCCACGTGGG CTTCGTCGGT GGGGTGAACA CGCCGCTGAT CCAGAAGTTC
GAGGCGGGTT TCGTGCAGGG CGCGAAGGCG GTCTCCGACA AGGTCAAGAT CGAGATCGAC
TACCTGACGC CTGCGGGCGA CATCTCCGGC TTCAACGACC CGGGCAAGGG CAACGTCGTG
GCCGAGGCGC AGATCGACAA GGGCGCCGAC GTGCTGTACC ACGCGGCGGG CGCCTCCGGT
AAGGGCGTGT TCGAGGCCGC CAAGGCGAAC GACGCGCTGG CCATCGGTGT CGACTCCGAC
CAGTACGAGC AGAAGACGGT CGCCGACGTC AAGGACGTCA TCATGACCTC GATGCTCAAG
CGCGTGGACG TGGCCGTCTA CGACTTCATC CGAGCGGTGG CCGAGGACGA CCTCGACTCG
TTGCCCGAGC GGTTCGACCT CGCCGCGGAC GCCGTGGGTT ACTCGACCTC CGGCGGCATG
GTCGACGACA TCGTCGATGT CCTCGAGGGG TACAAGCAGC AGATCGTGGA CGGCGAGATC
GAGGTCTCGG CGACCCCGTC GAACTGA
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| Protein sequence | MAGVLTLAAC AKDSGNDNAA SGGGESSGEC VTAAAPPRPE AGEGKREKEA EDVDASDLKV
GLAFDVGGRG DASFNDAAAA GVDKAVEELG VSDTTESTAT GTESEDAKQQ RLTQMAQQGY
NPIIAVGFAY SDAIDAVAPK FPDTQFAIVD DDSVDQPNVT PLVFTEEQGS FLVGVAAVYK
SENCHVGFVG GVNTPLIQKF EAGFVQGAKA VSDKVKIEID YLTPAGDISG FNDPGKGNVV
AEAQIDKGAD VLYHAAGASG KGVFEAAKAN DALAIGVDSD QYEQKTVADV KDVIMTSMLK
RVDVAVYDFI RAVAEDDLDS LPERFDLAAD AVGYSTSGGM VDDIVDVLEG YKQQIVDGEI
EVSATPSN
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