| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05290 |
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| Symbol | |
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| ID | 8385867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 532974 |
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| End bp | 534413 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644974626 |
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| Product | glycosidase |
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| Protein accession | YP_003132430 |
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| Protein GI | 257054598 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAAC GTGTCTTCGC CGTGGTCCTT TTGGTGTCCG CCTTGCTCAC CCTGCCGGTC
CGGACGACAC CACCGGCCGA TGCGGCACCA CCCGGCGAAC GCGACGTCAT CGCCACGCTG
TTCCAGTGGA ATTGGAACAG CGTCGCCCGC GCCTGCCACG AGCAACTGGG GCCCAACGGC
TACGGCGCGG TCCAGGTGTC CCCGCCCACG GAACACGTCG TCCTCGGCGA CGACGGCTAC
CCGTGGTGGC AGGACTATCA GCCGGTCTCC TACAAACTGG AAAGCCGACG CGGCACCCGC
GCCGAATTCG CGAACATGGT CAACGCCTGC CACGACGCCG GCGTGAAGGT GTACGTCGAC
GTGGTCGTCA ACCACATGAG CGGCCAGGAC GAATGCGGCA CGGGCAGCGC GGGATCGGAG
TACTGCCACT ACGAGTACCC CGAAGCGGGA TACGGCTACG ACGATTTCCA CCACTGCGGT
CGTAACGGCG ACGACAACAT CGTCGACTAC CACGACCGGT ACGAAGTGCA GAACTGCGAA
CTCGTCAACC TCGCCGACCT CGCCACCGAA TCCGAAACCG TACGAGACCG GATCGGCGCC
TACTTGAACG ACCTACTCGA CCTCGGAGTG GACGGATTCC GCGTCGACGC GGTCAAGCAC
ATCCCCGCCG AGGACGTCGC GGCCATCCTG AGCCGCCTGC GCTCGCCCGC CTACATCTAC
CAGGAGACGC TCTACGGGGA AGGCGAACCG ATCACCCCGG ACGAGTACCT CGACAACGGT
GACGTGTACG ACGGTCGGTA CGCCCGCGAC ATCGCGCGCA TCTTCAACTC CGAGAAACTG
GCGTACCTGC GGGACTTCGG CACCGCCGTG CCCTCGGACC GGATCGTGGT GTTCATCGAC
AACCACGACA GCCAACGCGG CGGCGAGACC CTGACCTATG CCGACGGGGC CCGGTACTCG
CTGGCCAACG CGTTCATGCT GGCCTGGCCG GTGGGCACAC CCAAGGTGAA CAGCAGCTTC
ACGTTCGACG ACTACGACGC CGGCCCACCG AGCGATGCGG CCGGCAACAC CACCGACGCC
ACCTGTGACT CGGGGGCGTG GCAGTGCGAA CACGACTGGC AGCCGATCCG CAACATGGTC
GGGTTCCACA ACGAGGTGCG CGGCGAGCCG GTGGTGCACT GGTGGGACAA CGGCAACGAC
ACCATCGCTT TCGGACGCGG CACCAAGGGT TACGTGGTGC TCAACGACGA GTCCGAGCCG
GTGACCGGAC GCTCCTTCCA CACCGGGCTG CCCGAGGGCA CCTACTGCGA CGTGTTGCAC
GGTGATGTCG TCAACGGTGC CTGCACCGGA CCCACCTACA CGGTGGACGC AGCCGGCTGG
TTCCGCGCCG ACATCGGCGC CCACGACGGT GTCGCATTAC ACGTCGGCGC TCGCGTATGA
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| Protein sequence | MFQRVFAVVL LVSALLTLPV RTTPPADAAP PGERDVIATL FQWNWNSVAR ACHEQLGPNG
YGAVQVSPPT EHVVLGDDGY PWWQDYQPVS YKLESRRGTR AEFANMVNAC HDAGVKVYVD
VVVNHMSGQD ECGTGSAGSE YCHYEYPEAG YGYDDFHHCG RNGDDNIVDY HDRYEVQNCE
LVNLADLATE SETVRDRIGA YLNDLLDLGV DGFRVDAVKH IPAEDVAAIL SRLRSPAYIY
QETLYGEGEP ITPDEYLDNG DVYDGRYARD IARIFNSEKL AYLRDFGTAV PSDRIVVFID
NHDSQRGGET LTYADGARYS LANAFMLAWP VGTPKVNSSF TFDDYDAGPP SDAAGNTTDA
TCDSGAWQCE HDWQPIRNMV GFHNEVRGEP VVHWWDNGND TIAFGRGTKG YVVLNDESEP
VTGRSFHTGL PEGTYCDVLH GDVVNGACTG PTYTVDAAGW FRADIGAHDG VALHVGARV
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