Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_05260 |
Symbol | |
ID | 8385864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 530961 |
End bp | 531491 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644974623 |
Product | hypothetical protein |
Protein accession | YP_003132427 |
Protein GI | 257054595 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGGAG GGCACTCGGT CATCGTCGTC CCGGTACCTG AACTCGAGGA CTACATAACG AGTCGGACAG CGCACTACGA CGCGTCGTTC CTCTCCACCG ACCCCGCCTT CGTGCACGCT CACATCACGC TGCTGGGACC TTGGTTGGCG GAGCCGTCGC AAGCCGACCT CGACGCGGTC GCGGCGATCA TGGCGGCGGC GGAACCGTTC GAGACCACTC TCTCCAGAAT CGAGACCTTC CCCGACGGGC TGATCTACCT ACGCCCGGAA CCGGACGAAC CGTTCCGGGC GTTGACAGCC GCCTTGATGA ACGCATTCCC ACACTGCCCG CCGTATGAAG GGCGGTTTCC GAACCCGGTG CCGCACCTGA CCCTGGACCG GCGAGCCGAG ACGATCACCC CGGAGAGCGT CGAGGCCGAC CTGCGTCACC TGCTCCCGGT CCGACTCCGC GTAGACCGGG TCGACCTCCA GTGGTGGGCC AACCACGACT GCCACGTGCG CGAGTCCTGG AAACTCGGCA AGCGTCGATA G
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Protein sequence | MSGGHSVIVV PVPELEDYIT SRTAHYDASF LSTDPAFVHA HITLLGPWLA EPSQADLDAV AAIMAAAEPF ETTLSRIETF PDGLIYLRPE PDEPFRALTA ALMNAFPHCP PYEGRFPNPV PHLTLDRRAE TITPESVEAD LRHLLPVRLR VDRVDLQWWA NHDCHVRESW KLGKRR
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