Gene Svir_05260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_05260 
Symbol 
ID8385864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp530961 
End bp531491 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID644974623 
Producthypothetical protein 
Protein accessionYP_003132427 
Protein GI257054595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAG GGCACTCGGT CATCGTCGTC CCGGTACCTG AACTCGAGGA CTACATAACG 
AGTCGGACAG CGCACTACGA CGCGTCGTTC CTCTCCACCG ACCCCGCCTT CGTGCACGCT
CACATCACGC TGCTGGGACC TTGGTTGGCG GAGCCGTCGC AAGCCGACCT CGACGCGGTC
GCGGCGATCA TGGCGGCGGC GGAACCGTTC GAGACCACTC TCTCCAGAAT CGAGACCTTC
CCCGACGGGC TGATCTACCT ACGCCCGGAA CCGGACGAAC CGTTCCGGGC GTTGACAGCC
GCCTTGATGA ACGCATTCCC ACACTGCCCG CCGTATGAAG GGCGGTTTCC GAACCCGGTG
CCGCACCTGA CCCTGGACCG GCGAGCCGAG ACGATCACCC CGGAGAGCGT CGAGGCCGAC
CTGCGTCACC TGCTCCCGGT CCGACTCCGC GTAGACCGGG TCGACCTCCA GTGGTGGGCC
AACCACGACT GCCACGTGCG CGAGTCCTGG AAACTCGGCA AGCGTCGATA G
 
Protein sequence
MSGGHSVIVV PVPELEDYIT SRTAHYDASF LSTDPAFVHA HITLLGPWLA EPSQADLDAV 
AAIMAAAEPF ETTLSRIETF PDGLIYLRPE PDEPFRALTA ALMNAFPHCP PYEGRFPNPV
PHLTLDRRAE TITPESVEAD LRHLLPVRLR VDRVDLQWWA NHDCHVRESW KLGKRR