| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05220 |
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| Symbol | |
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| ID | 8385860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 520806 |
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| End bp | 524663 |
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| Gene Length | 3858 bp |
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| Protein Length | 1285 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974619 |
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| Product | hypothetical protein |
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| Protein accession | YP_003132423 |
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| Protein GI | 257054591 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGA ACGAGGTGTA CCTGCGCGAC GTCCTCGACA TCCCCGAATC CGTCCACGCC
GGGGACTTCA AAGTCGAACT CACCGGAGGC TTCACCCAAG TCGAAGCCCG CGTCGCCGAA
TACGTCGTCA CCGACCAACT CCGGCAAGCC TTCGACAAAG CCCTGTCCAT CGTGCGCGCC
GCCGTGCGCG ACGGCACCTC GCACGCCGCC TACCTGCACG GCTCGTTCGG CTCCGGTAAA
AGCCACTTCC TCACCGTGCT GCACGCCGTG CTCAACAACC ACCCCGCGGC ACGGGCCAAA
CCCGGCCTGC AACCCGTCAT CGCCGACCAC GACGACTGGC TGCGCGGCAA GAAATTCCTC
ATGGTGCCCT ACCACCTCGT AGGCGCCACC GACCTCGACT CCGCCATCCT CGGCGGCTAC
GTCAACACCG TCCGCTCACT GCACCCCGAC CAGCCCACCC CGCCCGTCTA CCGGGCGGAC
GCCATGCTCG ACGACGCCCG CCGCTACCGT GAAGCCAGAG GCGATGACGC ATTCGTCGAC
TGGCTCAGCA TCGGCGCCAC CACGCCCGTC CCAGGCACAC CCGACGAGGA CGACGACCTC
GACCTCGACA TACCCGACGA CACCGGCATC AACGACACCG GATGGACCAG CGAACAACTC
GACCGGGCAT TCACCGCACC CGCCGGCGAC CCGGTTCGCG ACCGGCTCGT CCAAGCCCTG
CTGTCCGGTC CCATGTCCTC CTACATCCGC GGGGCCAGCG GCGACGCCGA AGCGTTCCTC
CCCCTGGAGA ACGGGCTGTC GATCATCACC AAACACGCCC GGGACCTCGG CTACGACGGG
CTGATCCTCT TCCTCGACGA ACTGATCCTG TGGTTGCAGG CCCACATGAG CGACCGCCAG
TTCGTCAACA ACCAGGTCAG CAAACTCGTC AAACTCATCG AATCCGGCGA CGCCGGCCGA
GTGCTGCCCA TCATCTCGTT CATCTCCCGG CAGCGCGATC TGTCCAAACT CGTCGGTGAG
GACGTCACCG GCGCCGAGGT CAAAGAGCTC GAACGGCAGG TCGAATACCT CGCCGGGCGG
TTCGACACCG TGCCCTTAGA AGACAGCAAC CTGCCCGCCA TCATCAAAGA ACGCGTCCTC
AAACCCAAAC CCGGCGGCCG GGAGATCCTC GACGCCGCGT TCGCCGGCAT CGAATCGGCC
AAACAAGCCG TCCGCGACGT GCTGCTCGAC GCGGACGGAG CCACCGGCGC CGACTGGCAG
GACTTCCGCG ACGTCTACCC GCTCTCACCC GCCCTGCTCA ACGTGCTCAT GGCGTTGTCC
GGTGCACTAC AACGTGAACG CACCGGGCTG AAACTGCTGC AGGAGATGCT GCGCCGCCGC
CGCGACGACA TGAAAGTCGG CGAACTCATC CCCCTCGGCG ACCTGTGGGA CGTGCTCGCC
GACGGCATCG GCGAAGCCTT CACCGACCGG CTACGCCGTG AGGCCGAAGC CGCCCAACGC
TTCTACACCA AAGCCCGCGC CTGGCTGGTC GAACGCCACG GTGGTGAGCA CACCCAACAG
TTCCGCGCCA CCGACCGACT CGTCAAAACG CTGATCCTCG CCGCGCTCGC GCCGCAGGTG
TCCGCACTCA CCCGGCTCAC CGGCAGCCGA CTCGCCGCAC TCAACCACGG GTCGCTACGC
GCCCGCACCG TTTCGGCCGG CTCGCTCGCC GTCACCAGGC TGCGCGAACT CCAGGCCGAA
TTCGGCGAAC TACGCCACGA AGGCGACGAG GACCCCGTCT TCCGGCTGCA ACTGTCCGAC
CTGGACGTCG AACCGTACCT CGACGCGGTC GGCGAACAGG ACACCCCCGG CGCGCGCCGC
ATCTGGATCA GAAAACAGCT GTGGAGCCAG TTGGGGGTCA ACGACACCGA CGACTTCGTG
TCGGAAAAAG AGATCGTCTG GAAGGGCACC CGGCGCACCG CCGAATTCGT GTTCGCCAAC
GTGCGCGACG AACGTGAACT GCCCGACGTG CAGTTCATGC CCAGCACCCC CGGCCGTATC
CGGTTCATCC TCGACTACCC GTTCGACGGC TCCGGCGACT ACACACCCCG GCACGATGCC
GAACGCATCC ACCGGATGCG CCGCGACGAC ATCACCGCGG CCACCATCGT GTGGTTGCCG
CACTTCTTCT CCGCGCAGAA ATCCGCCCAG CTCGGACGCC TTCTGAAGAT CAAATACCTG
CTGGAGCGCG ACCGGCTCGA CGACTACGTC AGAAACCGCT CCGCCGACGA ACGGGTCAAG
ATCCGCCACC AGCTCGAAGC GCAATGCGAC ACCCTGGAAA ACCAGCTCGC CGCCGCGCTG
CGTCAGCTCT ACGGCATCGC CGGCGGCGAC GACACCACCG TCGGCGCGCC CGTCGGCGAA
GACGGACACG TGATGTCGCT GTACCCCGAC CACAAGCCCA GACTGGCCGG TGGTGCGGGA
TTCGAATACA ACGCGTTGAC CCTGGCCGAC GGGTTGTTCG ACAAGCTCTA CCCGAAGCAT
CCGAACTTCG ACCCCACCGG CAACCGCAAG GCCATCACCC TCGGCGAACT GCGCACGGTC
CTCGACTGGA TCACCAAGGC CATGGAGGAC GGCAGCCGAC GAGTGGTGGT GGACCGCAAC
CACCTCGCCC TCGTGCGCAA GATCGTCCAC CCGTTGGAGC TCGGTGAGGT CAGCGACGGA
CCGCTCAACG TCTCCGCCGA ATGGCGACGC CGCATCGAAC AAGCCGCCAC CCAACACGGG
GTGACCGGCG ACCTGCGTGT GGAAGACATC CGCTCGTGGA TCGCCGACCT CGGCTACACC
GGGCTCGACA AACCCGTGGT CAACCTCATC ATCGCCACCT ACGCGATGCT GGCCGACCGC
ACCTGGACCC TGCACGGCAG CGTGCTGCGG CAACCACCCG AACTCGACAA GATCGGACCG
GGTCACGCCC TGCGGGCCCA GCAACTGCCC GACGCCGCCG AGTTCGCCAC CGCCCGAGAC
CGAGCCGCCG TGCTGTTCGG AATCGTCGTG CCCGACACCC TGTTCGCCCG CAACGTCAGC
CGGCTCGCCG AAGGTGTGCG CGCCAAGGTC GCGGAACTGG AGACACCGGT CAACGGGGTG
CGACGGATGT TGGAACGGCA CGCCGACACA CTCGGTCTCA CCCACCGGCC CGACGCGCCG
AGAGTGGTCG CCACTCGGGA CGCGGCCGAC CTGCTCGCCC GGCTGTCCGG TGCCGCCGAG
GACACCGATC TGGTGAACCG GCTCGCGAAA GCCACCTACG GTACCAACGA CACCGTGCTC
GCCGCCACCA TGGCGGCCGC TCCCCGGTTG CTCGAGTCGT TACGCGACGT CGAATGGTCG
CTGGTGTCGT CCGTGCAAGG CTTCGCAGGC AGGGGCGACC TCATCGGCAA CCGCGCCGAC
GCGCTGCTCG ACGAAGTCGG ACACGCCGCC GCCGAGGACG AGTTCGCCGT CTCGCTCGCG
CCCGTGCTCG AACAACTCCA ATCCAAAGCC GTGGCCTTGG TCAGCGATGC GGCCCGACTC
ACCGCCGTGG CCACTCCTGG CCCCGTCAGT CCCGTCCGCA CGGACACGGA GAACACATCG
AGCGGACAGG CCGCCGGAGC CGACACGGTG AGTCTCACCG ACACCGGGCA GCCCGGTATC
AGCCGCCACG AACCTGAACC CTCGGCCACC CCGTCCCATC GCGCACCGCG CCGCCTGCGG
GCCAGTGCCG CGGAACGCGA CCTCGCCGCG CTGCTCGAGG GCGTGCGTGA CGAGATCCGC
GACTACGCCC GTGAACACCC CGGAGCGGAG ATCGAGATCC TGTGGCGGAC GGTCGGGGGA
GAGGACAACG CGGAATGA
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| Protein sequence | MSTNEVYLRD VLDIPESVHA GDFKVELTGG FTQVEARVAE YVVTDQLRQA FDKALSIVRA
AVRDGTSHAA YLHGSFGSGK SHFLTVLHAV LNNHPAARAK PGLQPVIADH DDWLRGKKFL
MVPYHLVGAT DLDSAILGGY VNTVRSLHPD QPTPPVYRAD AMLDDARRYR EARGDDAFVD
WLSIGATTPV PGTPDEDDDL DLDIPDDTGI NDTGWTSEQL DRAFTAPAGD PVRDRLVQAL
LSGPMSSYIR GASGDAEAFL PLENGLSIIT KHARDLGYDG LILFLDELIL WLQAHMSDRQ
FVNNQVSKLV KLIESGDAGR VLPIISFISR QRDLSKLVGE DVTGAEVKEL ERQVEYLAGR
FDTVPLEDSN LPAIIKERVL KPKPGGREIL DAAFAGIESA KQAVRDVLLD ADGATGADWQ
DFRDVYPLSP ALLNVLMALS GALQRERTGL KLLQEMLRRR RDDMKVGELI PLGDLWDVLA
DGIGEAFTDR LRREAEAAQR FYTKARAWLV ERHGGEHTQQ FRATDRLVKT LILAALAPQV
SALTRLTGSR LAALNHGSLR ARTVSAGSLA VTRLRELQAE FGELRHEGDE DPVFRLQLSD
LDVEPYLDAV GEQDTPGARR IWIRKQLWSQ LGVNDTDDFV SEKEIVWKGT RRTAEFVFAN
VRDERELPDV QFMPSTPGRI RFILDYPFDG SGDYTPRHDA ERIHRMRRDD ITAATIVWLP
HFFSAQKSAQ LGRLLKIKYL LERDRLDDYV RNRSADERVK IRHQLEAQCD TLENQLAAAL
RQLYGIAGGD DTTVGAPVGE DGHVMSLYPD HKPRLAGGAG FEYNALTLAD GLFDKLYPKH
PNFDPTGNRK AITLGELRTV LDWITKAMED GSRRVVVDRN HLALVRKIVH PLELGEVSDG
PLNVSAEWRR RIEQAATQHG VTGDLRVEDI RSWIADLGYT GLDKPVVNLI IATYAMLADR
TWTLHGSVLR QPPELDKIGP GHALRAQQLP DAAEFATARD RAAVLFGIVV PDTLFARNVS
RLAEGVRAKV AELETPVNGV RRMLERHADT LGLTHRPDAP RVVATRDAAD LLARLSGAAE
DTDLVNRLAK ATYGTNDTVL AATMAAAPRL LESLRDVEWS LVSSVQGFAG RGDLIGNRAD
ALLDEVGHAA AEDEFAVSLA PVLEQLQSKA VALVSDAARL TAVATPGPVS PVRTDTENTS
SGQAAGADTV SLTDTGQPGI SRHEPEPSAT PSHRAPRRLR ASAAERDLAA LLEGVRDEIR
DYAREHPGAE IEILWRTVGG EDNAE
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