| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05050 |
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| Symbol | |
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| ID | 8385843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 502928 |
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| End bp | 504151 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644974603 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_003132407 |
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| Protein GI | 257054575 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.178369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA TCAAGGTCGA GGGCACCGTC GTCGAACTCG ACGGCGATGA GATGACCCGC
ATCATCTGGA AGTTCATCAA GGACAAGCTC ATCCACCCAT ACCTCGACAT CAACCTGGAG
TACTACGACC TGGGCATCGA GGAGCGGGAC CGCACCGACG ACCAGATCAC GGTCGACGCG
GCGCACGCCA TCGCCAAGCA CGGCGTGGGT GTCAAGTGCG CCACCATCAC CCCCGACGAG
GCCCGTGTCG AGGAGTTCGG CCTCAAGAAG ATGTGGCGCA GCCCCAACGG CACCATCCGC
AACATCCTGG GCGGTGTCGT CTTCCGCGAG CCGATCATCA TCTCCAACAT CCCCCGGCTC
GTGCCCGGTT GGACGAAGCC GATCATCATC GGCCGGCACG CCCACGGTGA CCAGTACAAG
GCGTCGGACT TCAAGGTCCC CGGCCCCGGC ACCGTGACCA TCACCTACAC GCCGGACGAC
GGCTCCGAGC CCATCGAGAT GGAGGTCGCC AAGTTCCCCG AGGGCGGCGG CGTCGCCATG
GGCATGTACA ACTTCCGCAA GTCGATCGAG GACTTCGCCC GCGCCTCGTT CAACTACGGC
CTCGACCGTG GCTACCCGGT CTACATGTCC ACCAAGAACA CGATCCTCAA GGCCTACGAC
GGCATGTTCA AGGACGTGTT CCAGGAGATC TACGACAACG AGTTCAAGGA CAAGTTCGAG
GCCCGGGGCC TGACCTACGA GCACCGGCTC ATCGACGACA TGGTGGCGGC CTCCCTCAAG
TGGGAGGGCG GCTACGTGTG GGCCTGCAAG AACTACGACG GTGACGTGCA GTCCGACACT
GTGGCCCAGG GCTTCGGCTC GCTCGGCCTG ATGACCTCGG TGCTGCGCAC GCCGGACGGC
CGCACGGTGG AGGCGGAGGC CGCGCACGGC ACGGTGACCC GCCACTACCG CCAGCACCAG
CAGGGCAAGC CGACCTCGAC CAACCCGATC GCGTCGATCT TCGCGTGGAC GCGCGGTTTG
GAGCACCGCG GCAAGCTCGA CAACAACTCC GAGCTGATCG GCTTCGCCAA CACGCTGGAG
AAGGTCGTCA TCGAGACCGT CGAGAGCGGC AAGATGACCA AGGACCTCGC GCTGCTGGTC
GGAGGCGACA CGCCGTACCT GACCACCGAG GAGTTCCTCG CGACGCTGGA CGCGAACCTC
GCGGCCAAGA TCGCTCAGAG CTGA
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| Protein sequence | MAKIKVEGTV VELDGDEMTR IIWKFIKDKL IHPYLDINLE YYDLGIEERD RTDDQITVDA
AHAIAKHGVG VKCATITPDE ARVEEFGLKK MWRSPNGTIR NILGGVVFRE PIIISNIPRL
VPGWTKPIII GRHAHGDQYK ASDFKVPGPG TVTITYTPDD GSEPIEMEVA KFPEGGGVAM
GMYNFRKSIE DFARASFNYG LDRGYPVYMS TKNTILKAYD GMFKDVFQEI YDNEFKDKFE
ARGLTYEHRL IDDMVAASLK WEGGYVWACK NYDGDVQSDT VAQGFGSLGL MTSVLRTPDG
RTVEAEAAHG TVTRHYRQHQ QGKPTSTNPI ASIFAWTRGL EHRGKLDNNS ELIGFANTLE
KVVIETVESG KMTKDLALLV GGDTPYLTTE EFLATLDANL AAKIAQS
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