| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_05030 |
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| Symbol | |
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| ID | 8385841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 500840 |
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| End bp | 502132 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644974601 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003132405 |
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| Protein GI | 257054573 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.307147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCATCG CACTGCTCGC ACTCGCGATC GGTGCCTTCG GCATCGGCAC GACCGAATTC
GTCCTGATGG GCGTACTGCC GGAGATCGCC CATGACCTCG GCATCTCCAT TTCCGAGGCC
GGCAACTTCA TCACCGCCTA CGCCCTCGGC GTCGTGGTGG GAGCCCCGTT GCTGACCGCC
GTCGCGGTAC GCCTGGCCCG TAAGACCATG TTGTTGTCCA TGATGGGCGT GTTCATCGCC
AGCAACGCCC TGTTCGCCTT CGCCCCCACC CCCGAGGTCG GCATGCTGTT CCGGTTCGCC
GCCGGACTCC CCCACGGCGC GTTCTTCGGA GCCGGGGCAG TGGTGGCCGC CACCCTCGTC
GGAGCACAGC GTCGCGCTAA GGCCGTGTCC ATGATGTTCC TCGGCCTGAC CCTCGCCAAC
GTCATCGGTG TACCTGCGGG AACCTTCCTC AGCCAGCAGG TGGGGTGGAG GGCCACCTTC
GGCGTGGTCG CGCTGATCGG CGTCGTGGCT TTGGTCTCCA TCGCCAAATT GATTCCCCAC
CAGCGGCCGA CCTCAAACGT CTCGCTGCGC GGTGAGCTCG GCGCGTTCCG CAAGCCCGAG
GTGTGGTTCG CCCTCGCCAT CGTCACGTTC GGCCTCGGCG GAGGGTTCGC CAGCCTCAGC
TACGTCGCAC CGGTGCTCAC CGACGTCGCC GGTTTCGACG GCACCAGCGT CACGCTCCTG
CTGTCGCTGG CGGGGCTGGG CATGACCTTC GGCAACGTGA TCGGCGGCCG ACTCGCCGAC
CGCTTCCCGC TGACCGGCCT GTACGGCGCG CTGACCGCCC TGGCGGTCGT GCTGCTGCTG
TTCACCGTCA CGGCGAACAG CAAGATCGGC GCCGCCGTCA TGCTGTTCCT CGTGGGTATG
ACCTCGTTCA TGGTCGGCCC GATGATGCAG TCCCGGATCA TGGAGAAGGC CGGCGGCGCG
CAGTCGATGG TGTCCGCCGC CGTGCAGTCG GCGTTCAACA TCGCCAACTC GATCGGTGCC
TACCTCGGAG GCCTCGCCAT CGCCGGTGGC TTCGGCCTCG TGTCCCCCAA CGTGGTGGGT
GCCATGCTCG CCCTGGTCGG GCTCACGCTG ACCGTGTCGT CCGCCGTCTT CGACCGGCGG
CGGGCGGCTC GGGTCGCAAG CGTCGACAGC CCCGACGGCG TCGATGACGT CGACAACCCC
CGGGTCGACG ACGCCGTCCA GGACGACTCC CCGCTCGAAC AGCCCGGCAT CGAGCCGCGG
CTGGAATCCC GACCCGAACC CGTCGCGGCG TGA
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| Protein sequence | MPIALLALAI GAFGIGTTEF VLMGVLPEIA HDLGISISEA GNFITAYALG VVVGAPLLTA
VAVRLARKTM LLSMMGVFIA SNALFAFAPT PEVGMLFRFA AGLPHGAFFG AGAVVAATLV
GAQRRAKAVS MMFLGLTLAN VIGVPAGTFL SQQVGWRATF GVVALIGVVA LVSIAKLIPH
QRPTSNVSLR GELGAFRKPE VWFALAIVTF GLGGGFASLS YVAPVLTDVA GFDGTSVTLL
LSLAGLGMTF GNVIGGRLAD RFPLTGLYGA LTALAVVLLL FTVTANSKIG AAVMLFLVGM
TSFMVGPMMQ SRIMEKAGGA QSMVSAAVQS AFNIANSIGA YLGGLAIAGG FGLVSPNVVG
AMLALVGLTL TVSSAVFDRR RAARVASVDS PDGVDDVDNP RVDDAVQDDS PLEQPGIEPR
LESRPEPVAA
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