Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04960 |
Symbol | |
ID | 8385834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 492757 |
End bp | 493374 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974594 |
Product | phosphoribosylglycinamide formyltransferase |
Protein accession | YP_003132398 |
Protein GI | 257054566 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN |
TIGRFAM ID | [TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGCTGC CCGTCCCGGT GAAGCTCGTC GTACTCGCCT CCGGCTCGGG AACCTTGTTG CAGGCCGTGC TCGACGCGGT GGGGGACGAC GGTTTCCCCG CCGAGGTCGT GGCGGTAGGG GCCGACCGCG AGAAGATCCA GGCCCTGGAG CGGGCCGAGC GGGCGGGCGT GCCGACGTTC ATCGTCAAGA CGGGTGACTA TCCCGACCGG GCGGCGTGGG ACAAGGCCCT CACCGAGGCC GTCGCCGCTC ATCGACCCGA TCTCGTGGTG TCCGCAGGTT TCCTCAAGAT CCTCGGGCCG GAGTTCCTGG CCCGTTTTCC CAACCGGGTG ATCAACACTC ATCCGGCACT GTTGCCCGCG TTCCCGGGTA TCCGGGCCGT GGCCGACGCT CTGGAGCTCG GGGCCAAGGT GACCGGGTCG ACCGTGCATT TCGTGGATGC GGGGGTGGAC ACGGGGCCGA TCATCGCGCA GGAGGCCGTG GTCGTGGAGC CCGAGGACGA CGAGGAGACG TTGCACGAGC GCATCAAGGC CGTGGAGCGC AGGCTGCTCG TGGACGTCAT CGCGAAACTG GCCCGTGTGG GGTGCACGGT GGACGGACGG AAGGTGAGGT TCTCGTGA
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Protein sequence | MQLPVPVKLV VLASGSGTLL QAVLDAVGDD GFPAEVVAVG ADREKIQALE RAERAGVPTF IVKTGDYPDR AAWDKALTEA VAAHRPDLVV SAGFLKILGP EFLARFPNRV INTHPALLPA FPGIRAVADA LELGAKVTGS TVHFVDAGVD TGPIIAQEAV VVEPEDDEET LHERIKAVER RLLVDVIAKL ARVGCTVDGR KVRFS
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