Gene Svir_04960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04960 
Symbol 
ID8385834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp492757 
End bp493374 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content68% 
IMG OID644974594 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_003132398 
Protein GI257054566 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGCTGC CCGTCCCGGT GAAGCTCGTC GTACTCGCCT CCGGCTCGGG AACCTTGTTG 
CAGGCCGTGC TCGACGCGGT GGGGGACGAC GGTTTCCCCG CCGAGGTCGT GGCGGTAGGG
GCCGACCGCG AGAAGATCCA GGCCCTGGAG CGGGCCGAGC GGGCGGGCGT GCCGACGTTC
ATCGTCAAGA CGGGTGACTA TCCCGACCGG GCGGCGTGGG ACAAGGCCCT CACCGAGGCC
GTCGCCGCTC ATCGACCCGA TCTCGTGGTG TCCGCAGGTT TCCTCAAGAT CCTCGGGCCG
GAGTTCCTGG CCCGTTTTCC CAACCGGGTG ATCAACACTC ATCCGGCACT GTTGCCCGCG
TTCCCGGGTA TCCGGGCCGT GGCCGACGCT CTGGAGCTCG GGGCCAAGGT GACCGGGTCG
ACCGTGCATT TCGTGGATGC GGGGGTGGAC ACGGGGCCGA TCATCGCGCA GGAGGCCGTG
GTCGTGGAGC CCGAGGACGA CGAGGAGACG TTGCACGAGC GCATCAAGGC CGTGGAGCGC
AGGCTGCTCG TGGACGTCAT CGCGAAACTG GCCCGTGTGG GGTGCACGGT GGACGGACGG
AAGGTGAGGT TCTCGTGA
 
Protein sequence
MQLPVPVKLV VLASGSGTLL QAVLDAVGDD GFPAEVVAVG ADREKIQALE RAERAGVPTF 
IVKTGDYPDR AAWDKALTEA VAAHRPDLVV SAGFLKILGP EFLARFPNRV INTHPALLPA
FPGIRAVADA LELGAKVTGS TVHFVDAGVD TGPIIAQEAV VVEPEDDEET LHERIKAVER
RLLVDVIAKL ARVGCTVDGR KVRFS