Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_04890 |
Symbol | |
ID | 8385827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 482137 |
End bp | 484590 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974587 |
Product | ATP-dependent DNA helicase PcrA |
Protein accession | YP_003132391 |
Protein GI | 257054559 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC TGTTCGATCT TCCCCCGGAA TCCGCAGGCG GCGGCGTTTC GCACGGGCCG CTGCTCGATG ACCTGAATCC CGCCCAGCGC GCGGCGGTGG AGCATCAGGG CCGCCCCCTG CTCATCGTCG CGGGCGCGGG CTCGGGTAAG ACCCGCGTGC TCACCAGGCG AATCGCCTAT CTGCTCGCGG CCAGGGGGGT GCATCCCGGC CAGATCATGG CCATCACGTT CACCAACAAG GCCGCGGCCG AGATGCGCGA CCGCGTGGTC GACCTCGTCG GAGGGCGTGC GGGCGCGATG TGGGTGTCGA CGTTTCACTC GATGTGCGTA CGCCTGCTGC GGCGCGAGGC GAAGACACTG GAGCTGACGT CGAACTTCTC CATCTACGAC GCGGACGACA GCAGGCGGCT GATGGCGTTG GTCGGGCGTG ATCTGGAGCT CGACCCGAAG CGGTACTCGG CACGCGCGCT CGCCAACCAC GTGTCCAACC TGAAAAACGA GCTCATCGAC CCCGACGCGG CGGCGGACGC GGCGGCGAAC GACTTCGAAC GTAGGGCCGC CGAGGCGTAT CGCGAGTACC AGAACAGGCT GGCGCAGGCC AACGCCCTGG ACTTCGACGA CCTCATCGCG AGGACGGTGG AGCTGTTCCA GGCCTTCCCC GATGTGGCCG AGCACTACCG GCGCCGGTTC CGGCACGTCC TCGTCGACGA GTACCAGGAC ACCAACCACG CGCAATACAC CCTGATCAGG GAGTTGGTCG GGACCGGTCC GACCGAGTCC GGACTGCCCC CGTCGGAACT GTGCGTCGTC GGTGACGCCG ACCAATCGAT CTACGCGTTC CGTGGGGCCA CCATCCGCAA CATCGAGGAG TTCGAACGCG ACTTCCCCGA CGCGCGCACC ATCCTGCTGG AGCAGAACTA CCGCTCGACG CAGACGATCC TGTCCGCGGC CAACGCCGTC ATCTCCCGAA ACCCCGGGCG CAGGGAGAAA CGTCTGTGGA CCGACGCGGG CCAGGGGGAA CGCATCGTCG GTTATGTGGC CGACAGCGAA CACGACGAGG CGGCGTTCGT GGCCGAGGAG ATCGACGCGC TGGTCGACCG GGGCGAGGCG AAGTACTCCG ACGTGGCCGT GTTCTACCGC ACCAACAACC AGTCCCGGGT GTTCGAGGAG ATCTTCATCC GGCTCGGCCT GCCGTATCGG GTCGTCGGCG GGGTGCGGTT CTACGAGCGC AAGGAGGTCA AGGACGCGCT CGCGTACCTG CGGGTGCTGG CCAACCCCGA GGACACCGTG AGCCTGCGGC GCATCCTCAA CGTGCCGAAA CGGGGCATCG GCGAGCGTGC CGAGGCCGTG GTGGCCACCC ACGCCGAGCG GGAGCGCATC TCGTTCGCGT CGGCGTTGCG CGACGCCGTC GCGGGGCGGA TCCCGCTGCT GAACCCTCGT TCGCAGAAGG CCATCACCGC GTTCGTGGAG CTGATCGACG GACTGCGGGA ACTCGTGGAC GAGGGCACGG ACGTCGCCGA CGTCCTGGAG GCGGTGCTCG ACCGCACCGG TTATCGCGCC GAACTGGAGG GTTCGGACGA CCCGCAGGAC GCCTCGCGGT TGGAGAACCT GGACGAGCTC GTCACGGTGG CACGTGAGTT CACCGAGTTC GCCCGGTCGG TAGGGGAGGA CACGGGTACG AGCGAGGACA CCGACGTCGC CACCGACTTC GAGGACGCTG ATGTCGCCGA GCCGGGATCG CTGTCGGCGT TTCTGGAACG GGTGTCGTTG GTGGCCGACG CCGATTCGGT CCCGTCCCCC GACGGCGAGG GAGCCGACGA GGCCGACGAG GACGGTGTGG TCACCCTGAT GACGGTGCAC ACGGCCAAGG GGCTCGAGTA CCCGGTGGTG TTCTGCACCG GCTGGGAGGA CGGCGTGTTC CCCCATCTGC GGGCGCTGGG CGAGCCGAAG GAGTTGGCGG AGGAACGCAG GCTGGCTTAC GTGGCGATCA CCCGGGCGCA ACGGCGGCTG TACGTTTCCC GTGCGTTGGT GCGCAATGCC TGGGGACAGC CGATGAGCAA CCCGGCGTCG AGGTTCCTCG ACGAGATCCC CGCCGAACTC GTCGACTGGC GGAGGCTGGC CCCGTCGGGT ACTCAGCGGG AGACGGGGAC ACCCCGCGCG GTCACGACGT GGGGTCGTGG GGTCGGCACC GGGGTCACCT CGAGCGGTGT GCGTACGACG TCGTTCCAAG CGGCGTCCCG CGGGGCCCGG AGCTCCCGCC CGAACGAGAG CTGGAAGAAC AAGGTGCCGC TCAAGCTCGA CGTGGGTGAT CGGGTCAACC ACGACAAGTA CGGGCTGGGC ACGGTGGTGG CCACGGAGGG GGTGGGTCCG CGGACCACGG CCACCATCGA TTTCGGCAGT GCCGGCACCG TGCGGCTCAT GCTGATCGGC AATGTGCCGA TGGTGAAGCT CTAG
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Protein sequence | MSTLFDLPPE SAGGGVSHGP LLDDLNPAQR AAVEHQGRPL LIVAGAGSGK TRVLTRRIAY LLAARGVHPG QIMAITFTNK AAAEMRDRVV DLVGGRAGAM WVSTFHSMCV RLLRREAKTL ELTSNFSIYD ADDSRRLMAL VGRDLELDPK RYSARALANH VSNLKNELID PDAAADAAAN DFERRAAEAY REYQNRLAQA NALDFDDLIA RTVELFQAFP DVAEHYRRRF RHVLVDEYQD TNHAQYTLIR ELVGTGPTES GLPPSELCVV GDADQSIYAF RGATIRNIEE FERDFPDART ILLEQNYRST QTILSAANAV ISRNPGRREK RLWTDAGQGE RIVGYVADSE HDEAAFVAEE IDALVDRGEA KYSDVAVFYR TNNQSRVFEE IFIRLGLPYR VVGGVRFYER KEVKDALAYL RVLANPEDTV SLRRILNVPK RGIGERAEAV VATHAERERI SFASALRDAV AGRIPLLNPR SQKAITAFVE LIDGLRELVD EGTDVADVLE AVLDRTGYRA ELEGSDDPQD ASRLENLDEL VTVAREFTEF ARSVGEDTGT SEDTDVATDF EDADVAEPGS LSAFLERVSL VADADSVPSP DGEGADEADE DGVVTLMTVH TAKGLEYPVV FCTGWEDGVF PHLRALGEPK ELAEERRLAY VAITRAQRRL YVSRALVRNA WGQPMSNPAS RFLDEIPAEL VDWRRLAPSG TQRETGTPRA VTTWGRGVGT GVTSSGVRTT SFQAASRGAR SSRPNESWKN KVPLKLDVGD RVNHDKYGLG TVVATEGVGP RTTATIDFGS AGTVRLMLIG NVPMVKL
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