Gene Svir_04680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04680 
Symbol 
ID8385806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp460027 
End bp460329 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content63% 
IMG OID644974566 
ProductTranscription factor WhiB 
Protein accessionYP_003132370 
Protein GI257054538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0245221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA CGCGCAGACT CCCTGGCCCG AACGCCGATG TTTGGGACTG GCAACTGGAG 
GGGGCTTGTC GGGGAATGGA CAGTGGTTCC TTTTTCCATC CCGATGGAGA AAGAGGACCG
GCACGAGCGA GGAGGGAGGC GCGAGCCAAG GCCATCTGCC ACACCTGCCC GGTATTGGAG
ATGTGCCGTG AGCACGCACT GACCGTTCAC GAGCCGTACG GCATCTGGGG CGGCCTCTCG
GAATCCGAAC GAGAGACGAT CATCCGGTCG CAGAAGCGTG CTCTCACGCT GACCTCACGC
TGA
 
Protein sequence
MADTRRLPGP NADVWDWQLE GACRGMDSGS FFHPDGERGP ARARREARAK AICHTCPVLE 
MCREHALTVH EPYGIWGGLS ESERETIIRS QKRALTLTSR