Gene Svir_04620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_04620 
Symbol 
ID8385800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp454233 
End bp454889 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID644974560 
Productacetyltransferase (isoleucine patch superfamily) 
Protein accessionYP_003132364 
Protein GI257054532 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.503837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTCCTG AGCCCACTGT CGTCCATCCA CTGCCGGACC ACGACCGCGT GGTGTTCCTC 
AAACCGCTGG TGGGTTCCCC CAAGATCGTG GTGGGGGAGT ACACCTACTA CGACGATCCG
GAACACGCGA CCGAGTTCGA GACCCGCAAC GTGCTCTACT CCTACGGTCC CGAACGACTC
GTCATCGGCA AGTACTGCGC TATCGCCTCG GGCACGACGT TCATCATGGC CGGTGCGGAG
CACCCGACGA TGGGGGTGTC CACGTTCCCG TTCACGATGT TCGGCGGGGA GTGGGCGGCA
CGGACGATGG ACATCGTCAC CTCGATGCCG AGTCGGGGCG ACACCGTCGT CGGCAACGAC
GTGTGGTTCG GCTATCGGGC CACCGTGTTG CCCGGTGTGC GGATCGGGGA TGGCGCCATC
GTCGCGGCCG GTGCCGTGGT GACGGCCGAT GTCCCGCCTT ACACGATCGT CGGCGGTAAT
CCGGCCAGGC CGATCCGGGC CCGCTTCGAC GACGCCGACG TGGAGCGCCT ACTCCGGGCC
GCGTGGTGGG ACTGGCCGGT CGAACTCGTC ACCGAGCATG CTCGCACGAT CATGAGTGGC
ACGCCGGCCG ACATCGCCCG TATCGCGGCG GACCACGGCC TGGAGAAGTC CCTGTGA
 
Protein sequence
MPPEPTVVHP LPDHDRVVFL KPLVGSPKIV VGEYTYYDDP EHATEFETRN VLYSYGPERL 
VIGKYCAIAS GTTFIMAGAE HPTMGVSTFP FTMFGGEWAA RTMDIVTSMP SRGDTVVGND
VWFGYRATVL PGVRIGDGAI VAAGAVVTAD VPPYTIVGGN PARPIRARFD DADVERLLRA
AWWDWPVELV TEHARTIMSG TPADIARIAA DHGLEKSL